Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ARHGEF9O43307 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARHGEF9O43307 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.75■□□□□ 0.91
ARHGEF9O43307 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ARHGEF9O43307 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
ARHGEF9O43307 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF9O43307 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF9O43307 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF9O43307 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF9O43307 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.74■□□□□ 0.91
ARHGEF9O43307 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.74■□□□□ 0.91
ARHGEF9O43307 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF9O43307 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF9O43307 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF9O43307 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ARHGEF9O43307 ABCB10P4-201ENST00000566803 2184 ntBASIC20.73■□□□□ 0.91
ARHGEF9O43307 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF9O43307 AC090877.2-201ENST00000558441 1738 ntBASIC20.73■□□□□ 0.91
ARHGEF9O43307 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.73■□□□□ 0.91
ARHGEF9O43307 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF9O43307 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ARHGEF9O43307 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.73■□□□□ 0.91
ARHGEF9O43307 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF9O43307 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF9O43307 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF9O43307 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF9O43307 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.72■□□□□ 0.91
ARHGEF9O43307 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF9O43307 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF9O43307 LONRF2P2-201ENST00000439212 571 ntBASIC20.72■□□□□ 0.91
ARHGEF9O43307 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF9O43307 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF9O43307 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF9O43307 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF9O43307 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF9O43307 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF9O43307 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF9O43307 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF9O43307 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARHGEF9O43307 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ARHGEF9O43307 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARHGEF9O43307 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARHGEF9O43307 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARHGEF9O43307 MIR935-201ENST00000401179 91 ntBASIC20.71■□□□□ 0.91
ARHGEF9O43307 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ARHGEF9O43307 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARHGEF9O43307 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ARHGEF9O43307 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARHGEF9O43307 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.7■□□□□ 0.9
ARHGEF9O43307 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.7■□□□□ 0.9
ARHGEF9O43307 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
ARHGEF9O43307 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ARHGEF9O43307 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARHGEF9O43307 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.7■□□□□ 0.9
ARHGEF9O43307 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
ARHGEF9O43307 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.7■□□□□ 0.9
ARHGEF9O43307 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.7■□□□□ 0.9
ARHGEF9O43307 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ARHGEF9O43307 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARHGEF9O43307 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ARHGEF9O43307 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
ARHGEF9O43307 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
ARHGEF9O43307 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
ARHGEF9O43307 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARHGEF9O43307 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARHGEF9O43307 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ARHGEF9O43307 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.69■□□□□ 0.9
ARHGEF9O43307 KRT125P-201ENST00000546827 989 ntBASIC20.69■□□□□ 0.9
ARHGEF9O43307 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARHGEF9O43307 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.69■□□□□ 0.9
ARHGEF9O43307 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARHGEF9O43307 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
ARHGEF9O43307 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ARHGEF9O43307 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ARHGEF9O43307 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ARHGEF9O43307 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ARHGEF9O43307 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.68■□□□□ 0.9
ARHGEF9O43307 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ARHGEF9O43307 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.68■□□□□ 0.9
ARHGEF9O43307 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.68■□□□□ 0.9
ARHGEF9O43307 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ARHGEF9O43307 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.68■□□□□ 0.9
ARHGEF9O43307 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.68■□□□□ 0.9
ARHGEF9O43307 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARHGEF9O43307 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARHGEF9O43307 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARHGEF9O43307 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARHGEF9O43307 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARHGEF9O43307 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARHGEF9O43307 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.68■□□□□ 0.9
ARHGEF9O43307 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARHGEF9O43307 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARHGEF9O43307 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF9O43307 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.67■□□□□ 0.9
ARHGEF9O43307 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF9O43307 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF9O43307 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ARHGEF9O43307 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.67■□□□□ 0.9
ARHGEF9O43307 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF9O43307 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms