Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF11O14788 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF11O14788 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF11O14788 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TNFSF11O14788 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF11O14788 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.29■□□□□ 0.84
TNFSF11O14788 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.29■□□□□ 0.84
TNFSF11O14788 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF11O14788 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF11O14788 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF11O14788 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF11O14788 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.29■□□□□ 0.84
TNFSF11O14788 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF11O14788 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF11O14788 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
TNFSF11O14788 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TNFSF11O14788 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF11O14788 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF11O14788 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.28■□□□□ 0.84
TNFSF11O14788 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF11O14788 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF11O14788 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TNFSF11O14788 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFSF11O14788 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.27■□□□□ 0.84
TNFSF11O14788 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF11O14788 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF11O14788 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF11O14788 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF11O14788 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TNFSF11O14788 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.26■□□□□ 0.83
TNFSF11O14788 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF11O14788 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF11O14788 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF11O14788 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF11O14788 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF11O14788 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF11O14788 SRD5A1P1-201ENST00000442297 786 ntBASIC20.26■□□□□ 0.83
TNFSF11O14788 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TNFSF11O14788 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF11O14788 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TNFSF11O14788 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF11O14788 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF11O14788 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF11O14788 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.26■□□□□ 0.83
TNFSF11O14788 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF11O14788 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF11O14788 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
TNFSF11O14788 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF11O14788 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.25■□□□□ 0.83
TNFSF11O14788 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.25■□□□□ 0.83
TNFSF11O14788 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TNFSF11O14788 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF11O14788 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF11O14788 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF11O14788 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.25■□□□□ 0.83
TNFSF11O14788 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF11O14788 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.24■□□□□ 0.83
TNFSF11O14788 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF11O14788 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TNFSF11O14788 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF11O14788 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF11O14788 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TNFSF11O14788 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.24■□□□□ 0.83
TNFSF11O14788 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF11O14788 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TNFSF11O14788 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF11O14788 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
TNFSF11O14788 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF11O14788 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.23■□□□□ 0.83
TNFSF11O14788 C17orf82-201ENST00000623772 1530 ntBASIC20.23■□□□□ 0.83
TNFSF11O14788 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF11O14788 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF11O14788 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF11O14788 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF11O14788 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF11O14788 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TNFSF11O14788 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TNFSF11O14788 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF11O14788 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF11O14788 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF11O14788 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF11O14788 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF11O14788 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF11O14788 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF11O14788 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.22■□□□□ 0.83
TNFSF11O14788 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TNFSF11O14788 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF11O14788 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF11O14788 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF11O14788 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNFSF11O14788 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TNFSF11O14788 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.21■□□□□ 0.83
TNFSF11O14788 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.21■□□□□ 0.83
TNFSF11O14788 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNFSF11O14788 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TNFSF11O14788 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.21■□□□□ 0.83
TNFSF11O14788 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.21■□□□□ 0.83
TNFSF11O14788 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.21■□□□□ 0.83
TNFSF11O14788 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TNFSF11O14788 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms