Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01548A6NM66 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.86■□□□□ 0.45
LINC01548A6NM66 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LINC01548A6NM66 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01548A6NM66 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01548A6NM66 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LINC01548A6NM66 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.86■□□□□ 0.45
LINC01548A6NM66 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.86■□□□□ 0.45
LINC01548A6NM66 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01548A6NM66 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.86■□□□□ 0.45
LINC01548A6NM66 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01548A6NM66 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01548A6NM66 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01548A6NM66 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
LINC01548A6NM66 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01548A6NM66 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01548A6NM66 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01548A6NM66 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01548A6NM66 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01548A6NM66 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LINC01548A6NM66 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.85■□□□□ 0.45
LINC01548A6NM66 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC01548A6NM66 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01548A6NM66 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01548A6NM66 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.84■□□□□ 0.45
LINC01548A6NM66 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.84■□□□□ 0.45
LINC01548A6NM66 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.84■□□□□ 0.45
LINC01548A6NM66 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01548A6NM66 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01548A6NM66 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.84■□□□□ 0.45
LINC01548A6NM66 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LINC01548A6NM66 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LINC01548A6NM66 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.84■□□□□ 0.45
LINC01548A6NM66 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01548A6NM66 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01548A6NM66 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01548A6NM66 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01548A6NM66 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC01548A6NM66 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC01548A6NM66 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
LINC01548A6NM66 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.83■□□□□ 0.45
LINC01548A6NM66 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01548A6NM66 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01548A6NM66 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01548A6NM66 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01548A6NM66 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01548A6NM66 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.83■□□□□ 0.44
LINC01548A6NM66 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01548A6NM66 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01548A6NM66 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01548A6NM66 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01548A6NM66 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01548A6NM66 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01548A6NM66 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01548A6NM66 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01548A6NM66 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01548A6NM66 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.82■□□□□ 0.44
LINC01548A6NM66 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01548A6NM66 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LINC01548A6NM66 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01548A6NM66 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LINC01548A6NM66 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.82■□□□□ 0.44
LINC01548A6NM66 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01548A6NM66 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01548A6NM66 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC01548A6NM66 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01548A6NM66 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC01548A6NM66 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01548A6NM66 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01548A6NM66 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01548A6NM66 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01548A6NM66 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC01548A6NM66 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01548A6NM66 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01548A6NM66 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LINC01548A6NM66 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01548A6NM66 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.8■□□□□ 0.44
LINC01548A6NM66 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.8■□□□□ 0.44
LINC01548A6NM66 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.8■□□□□ 0.44
LINC01548A6NM66 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.8■□□□□ 0.44
LINC01548A6NM66 C17orf82-201ENST00000623772 1530 ntBASIC17.8■□□□□ 0.44
LINC01548A6NM66 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01548A6NM66 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01548A6NM66 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01548A6NM66 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01548A6NM66 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01548A6NM66 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01548A6NM66 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01548A6NM66 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01548A6NM66 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01548A6NM66 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01548A6NM66 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.79■□□□□ 0.44
LINC01548A6NM66 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01548A6NM66 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01548A6NM66 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.79■□□□□ 0.44
LINC01548A6NM66 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01548A6NM66 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01548A6NM66 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01548A6NM66 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.78■□□□□ 0.44
LINC01548A6NM66 SRD5A1P1-201ENST00000442297 786 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms