Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC11.26□□□□□ -0.61
CD28P10747 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
CD28P10747 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.26□□□□□ -0.61
CD28P10747 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.26□□□□□ -0.61
CD28P10747 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CD28P10747 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
CD28P10747 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CD28P10747 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.26□□□□□ -0.61
CD28P10747 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CD28P10747 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.25□□□□□ -0.61
CD28P10747 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
CD28P10747 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.25□□□□□ -0.61
CD28P10747 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
CD28P10747 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
CD28P10747 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
CD28P10747 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 GSN-215ENST00000545652 2428 ntTSL 2 BASIC11.25□□□□□ -0.61
CD28P10747 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.25□□□□□ -0.61
CD28P10747 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
CD28P10747 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
CD28P10747 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
CD28P10747 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC11.25□□□□□ -0.61
CD28P10747 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC11.25□□□□□ -0.61
CD28P10747 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC11.25□□□□□ -0.61
CD28P10747 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.25□□□□□ -0.61
CD28P10747 ST13P19-201ENST00000442505 1124 ntBASIC11.25□□□□□ -0.61
CD28P10747 RN7SL277P-201ENST00000481521 288 ntBASIC11.25□□□□□ -0.61
CD28P10747 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC11.25□□□□□ -0.61
CD28P10747 NPM1P43-201ENST00000558669 786 ntBASIC11.25□□□□□ -0.61
CD28P10747 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 MIR4750-201ENST00000584564 56 ntBASIC11.25□□□□□ -0.61
CD28P10747 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 AC005632.3-201ENST00000605544 308 ntBASIC11.25□□□□□ -0.61
CD28P10747 AC007881.3-201ENST00000608897 607 ntBASIC11.25□□□□□ -0.61
CD28P10747 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC11.25□□□□□ -0.61
CD28P10747 YRDCP1-201ENST00000621419 643 ntBASIC11.25□□□□□ -0.61
CD28P10747 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
CD28P10747 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
CD28P10747 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.25□□□□□ -0.61
CD28P10747 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
CD28P10747 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
CD28P10747 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC11.25□□□□□ -0.61
CD28P10747 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.25□□□□□ -0.61
CD28P10747 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
CD28P10747 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
CD28P10747 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
CD28P10747 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC11.25□□□□□ -0.61
CD28P10747 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
CD28P10747 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CD28P10747 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC11.25□□□□□ -0.61
CD28P10747 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.25□□□□□ -0.61
CD28P10747 AC018529.2-202ENST00000611482 3087 ntBASIC11.24□□□□□ -0.61
CD28P10747 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
CD28P10747 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CD28P10747 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.24□□□□□ -0.61
CD28P10747 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.24□□□□□ -0.61
CD28P10747 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.24□□□□□ -0.61
CD28P10747 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.24□□□□□ -0.61
CD28P10747 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
CD28P10747 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.24□□□□□ -0.61
CD28P10747 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 AJ011931.1-201ENST00000618749 2492 ntBASIC11.24□□□□□ -0.61
CD28P10747 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms