Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 AL591471.1-201ENST00000621855 229 ntBASIC11.1□□□□□ -0.63
TRBV12-3P01733 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 AL805961.1-203ENST00000641078 1258 ntBASIC11.1□□□□□ -0.63
TRBV12-3P01733 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 KRT8P21-201ENST00000430398 1491 ntBASIC11.1□□□□□ -0.63
TRBV12-3P01733 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.1□□□□□ -0.63
TRBV12-3P01733 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 AC138028.6-201ENST00000616106 1482 ntBASIC11.09□□□□□ -0.63
TRBV12-3P01733 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 JTB-202ENST00000356648 1040 ntTSL 2 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 SPTLC1P5-201ENST00000450718 252 ntBASIC11.09□□□□□ -0.63
TRBV12-3P01733 RN7SL277P-201ENST00000481521 288 ntBASIC11.09□□□□□ -0.63
TRBV12-3P01733 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 ACTG1P17-201ENST00000558391 1119 ntBASIC11.09□□□□□ -0.63
TRBV12-3P01733 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 TCAM1P-207ENST00000485295 1537 ntBASIC11.09□□□□□ -0.63
TRBV12-3P01733 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRBV12-3P01733 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
TRBV12-3P01733 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms