RNA–Protein interactions for RNA: ENST00000378602.3

TMEM52-203, Transcript of transmembrane protein 52, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM52, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM52-203ENST00000378602 NISCHQ9Y2I1 1504 aa36.58■■■■□ 3.45
TMEM52-203ENST00000378602 ABCC9O60706 1549 aa32.96■■■□□ 2.87
TMEM52-203ENST00000378602 CCDC180Q9P1Z9 1646 aa32.84■■■□□ 2.85
TMEM52-203ENST00000378602 RB1CC1Q8TDY2 1594 aa31.32■■■□□ 2.6
TMEM52-203ENST00000378602 NACADO15069 1562 aa31.08■■■□□ 2.57
TMEM52-203ENST00000378602 DCAF8L2P0C7V8 631 aa30.95■■■□□ 2.55
TMEM52-203ENST00000378602 DNAJC5BQ9UF47 199 aa30.92■■■□□ 2.54
TMEM52-203ENST00000378602 PABPN1Q86U42 306 aaKnown RBP eCLIP30.66■■■□□ 2.5
TMEM52-203ENST00000378602 MYO15BQ96JP2 1530 aa30.61■■■□□ 2.49
TMEM52-203ENST00000378602 UNC13AQ9UPW8 1703 aa30.56■■■□□ 2.48
TMEM52-203ENST00000378602 BICRAQ9NZM4 1560 aa30.39■■■□□ 2.46
TMEM52-203ENST00000378602 ZCCHC6Q5VYS8 1495 aaKnown RBP30.31■■■□□ 2.44
TMEM52-203ENST00000378602 DCAF1Q9Y4B6 1507 aa30.19■■■□□ 2.42
TMEM52-203ENST00000378602 SHROOM4Q9ULL8 1493 aa29.99■■■□□ 2.39
TMEM52-203ENST00000378602 SCRIBQ14160 1630 aa29.96■■■□□ 2.39
TMEM52-203ENST00000378602 CC2D2AQ9P2K1 1620 aa29.74■■■□□ 2.35
TMEM52-203ENST00000378602 CECR2Q9BXF3 1484 aa29.68■■■□□ 2.34
TMEM52-203ENST00000378602 EIF4G1Q04637 1599 aaKnown RBP29.67■■■□□ 2.34
TMEM52-203ENST00000378602 NCAPD3P42695 1498 aa28.68■■■□□ 2.18
TMEM52-203ENST00000378602 ATAD2BQ9ULI0 1458 aa28.6■■■□□ 2.17
TMEM52-203ENST00000378602 SMARCA4P51532 1647 aa28.56■■■□□ 2.16
TMEM52-203ENST00000378602 SMARCA2P51531 1590 aa28.52■■■□□ 2.16
TMEM52-203ENST00000378602 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
TMEM52-203ENST00000378602 ERCC6Q03468 1493 aa28.47■■■□□ 2.15
TMEM52-203ENST00000378602 DNAJC5Q9H3Z4 198 aa28.44■■■□□ 2.14
TMEM52-203ENST00000378602 BAZ1AQ9NRL2 1556 aaPredicted RBP28.41■■■□□ 2.14
TMEM52-203ENST00000378602 CUX2O14529 1486 aa28.41■■■□□ 2.14
TMEM52-203ENST00000378602 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
TMEM52-203ENST00000378602 NESP48681 1621 aa28.28■■■□□ 2.12
TMEM52-203ENST00000378602 PEG3Q9GZU2 1588 aa28.25■■■□□ 2.11
TMEM52-203ENST00000378602 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.1
TMEM52-203ENST00000378602 LAMC3Q9Y6N6 1575 aa28.06■■■□□ 2.08
TMEM52-203ENST00000378602 THOC2Q8NI27 1593 aaKnown RBP28■■■□□ 2.07
TMEM52-203ENST00000378602 PDS5BQ9NTI5 1447 aa27.91■■■□□ 2.06
TMEM52-203ENST00000378602 KIF21AQ7Z4S6 1674 aa27.9■■■□□ 2.06
TMEM52-203ENST00000378602 WIZO95785 1651 aa27.84■■■□□ 2.05
TMEM52-203ENST00000378602 CADPSQ9ULU8 1353 aa27.82■■■□□ 2.04
TMEM52-203ENST00000378602 MRC2Q9UBG0 1479 aa27.69■■■□□ 2.02
TMEM52-203ENST00000378602 WDR62O43379 1518 aa27.61■■■□□ 2.01
TMEM52-203ENST00000378602 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2.01
TMEM52-203ENST00000378602 CEP164Q9UPV0 1460 aa27.57■■■□□ 2
TMEM52-203ENST00000378602 FANCD2Q9BXW9 1451 aa27.52■■■□□ 2
TMEM52-203ENST00000378602 TOP2AP11388 1531 aaKnown RBP27.51■■□□□ 1.99
TMEM52-203ENST00000378602 CFTRP13569 1480 aa27.49■■□□□ 1.99
TMEM52-203ENST00000378602 URB2Q14146 1524 aaKnown RBP27.29■■□□□ 1.96
TMEM52-203ENST00000378602 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
TMEM52-203ENST00000378602 CCDC88BA6NC98 1476 aa27.19■■□□□ 1.94
TMEM52-203ENST00000378602 PRDM2Q13029 1718 aa27.19■■□□□ 1.94
TMEM52-203ENST00000378602 OSCARQ8IYS5 282 aa27.09■■□□□ 1.93
TMEM52-203ENST00000378602 IFT140Q96RY7 1462 aa27■■□□□ 1.91
TMEM52-203ENST00000378602 TOPBP1Q92547 1522 aa26.99■■□□□ 1.91
TMEM52-203ENST00000378602 ZNF608Q9ULD9 1512 aaPredicted RBP26.97■■□□□ 1.91
TMEM52-203ENST00000378602 ABCC8Q09428 1581 aa26.92■■□□□ 1.9
TMEM52-203ENST00000378602 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
TMEM52-203ENST00000378602 EIF4G3O43432 1585 aaKnown RBP26.83■■□□□ 1.89
TMEM52-203ENST00000378602 RIMBP3CA6NJZ7 1639 aa26.76■■□□□ 1.87
TMEM52-203ENST00000378602 RIMBP3BA6NNM3 1639 aa26.76■■□□□ 1.87
TMEM52-203ENST00000378602 RIMBP3Q9UFD9 1639 aa26.76■■□□□ 1.87
TMEM52-203ENST00000378602 TARBP1Q13395 1621 aaKnown RBP26.73■■□□□ 1.87
TMEM52-203ENST00000378602 AQRO60306 1485 aaKnown RBP eCLIP26.71■■□□□ 1.87
TMEM52-203ENST00000378602 POLA1P09884 1462 aaPredicted RBP26.71■■□□□ 1.87
TMEM52-203ENST00000378602 ARHGEF11O15085 1522 aa26.68■■□□□ 1.86
TMEM52-203ENST00000378602 CHD1O14646 1710 aa26.62■■□□□ 1.85
TMEM52-203ENST00000378602 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
TMEM52-203ENST00000378602 SOGA1O94964 1423 aa26.58■■□□□ 1.85
TMEM52-203ENST00000378602 FBLN2P98095 1184 aa26.58■■□□□ 1.85
TMEM52-203ENST00000378602 TDRD9Q8NDG6 1382 aaKnown RBP26.55■■□□□ 1.84
TMEM52-203ENST00000378602 FGD5Q6ZNL6 1462 aa26.55■■□□□ 1.84
TMEM52-203ENST00000378602 CUX1P39880 1505 aa26.5■■□□□ 1.83
TMEM52-203ENST00000378602 CYB5RLQ6IPT4 315 aa26.48■■□□□ 1.83
TMEM52-203ENST00000378602 SNAPC4Q5SXM2 1469 aa26.47■■□□□ 1.83
TMEM52-203ENST00000378602 WDR97A6NE52 1622 aa26.47■■□□□ 1.83
TMEM52-203ENST00000378602 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
TMEM52-203ENST00000378602 GRIN2BQ13224 1484 aa26.37■■□□□ 1.81
TMEM52-203ENST00000378602 MAGI1Q96QZ7 1491 aaPredicted RBP26.37■■□□□ 1.81
TMEM52-203ENST00000378602 CHMP7Q8WUX9 453 aaPredicted RBP26.36■■□□□ 1.81
TMEM52-203ENST00000378602 SUPT5HO00267 1087 aaKnown RBP26.35■■□□□ 1.81
TMEM52-203ENST00000378602 CLASP1Q7Z460 1538 aa26.32■■□□□ 1.8
TMEM52-203ENST00000378602 SYNJ1O43426 1573 aa26.31■■□□□ 1.8
TMEM52-203ENST00000378602 SYNJ2O15056 1496 aa26.29■■□□□ 1.8
TMEM52-203ENST00000378602 GAPVD1Q14C86 1478 aa26.27■■□□□ 1.8
TMEM52-203ENST00000378602 PBRM1Q86U86 1689 aa26.25■■□□□ 1.79
TMEM52-203ENST00000378602 TRHP20396 242 aaPredicted RBP26.23■■□□□ 1.79
TMEM52-203ENST00000378602 ABCA10Q8WWZ4 1543 aa26.22■■□□□ 1.79
TMEM52-203ENST00000378602 ABCA5Q8WWZ7 1642 aa26.19■■□□□ 1.78
TMEM52-203ENST00000378602 WRNQ14191 1432 aaPredicted RBP eCLIP26.12■■□□□ 1.77
TMEM52-203ENST00000378602 TOP2BQ02880 1626 aa26.05■■□□□ 1.76
TMEM52-203ENST00000378602 BIVM-ERCC5R4GMW8 1640 aa26.05■■□□□ 1.76
TMEM52-203ENST00000378602 GRIN2AQ12879 1464 aa26.03■■□□□ 1.76
TMEM52-203ENST00000378602 ADAMTS12P58397 1594 aa26.02■■□□□ 1.76
TMEM52-203ENST00000378602 NUP160Q12769 1436 aa25.94■■□□□ 1.74
TMEM52-203ENST00000378602 CEP170Q5SW79 1584 aa25.94■■□□□ 1.74
TMEM52-203ENST00000378602 FHAD1B1AJZ9 1412 aa25.93■■□□□ 1.74
TMEM52-203ENST00000378602 ERCC6L2Q5T890 1561 aa25.9■■□□□ 1.74
TMEM52-203ENST00000378602 ERICH3Q5RHP9 1530 aa25.89■■□□□ 1.74
TMEM52-203ENST00000378602 SHROOM2Q13796 1616 aa25.81■■□□□ 1.72
TMEM52-203ENST00000378602 PRG4Q92954 1404 aaPredicted RBP25.71■■□□□ 1.71
TMEM52-203ENST00000378602 JPH4Q96JJ6 628 aa25.66■■□□□ 1.7
TMEM52-203ENST00000378602 RUSC2Q8N2Y8 1516 aa25.65■■□□□ 1.7
TMEM52-203ENST00000378602 KIF27Q86VH2 1401 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms