Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.28□□□□□ -0.12
PFDN4Q9NQP4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.28□□□□□ -0.12
PFDN4Q9NQP4 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN4Q9NQP4 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN4Q9NQP4 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN4Q9NQP4 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN4Q9NQP4 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN4Q9NQP4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN4Q9NQP4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN4Q9NQP4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PFDN4Q9NQP4 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN4Q9NQP4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 KHSRPP1-201ENST00000427983 1768 ntBASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN4Q9NQP4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 DGCR5-201ENST00000399539 862 ntBASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 AP006294.1-201ENST00000415407 339 ntBASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 AC245100.3-201ENST00000441281 285 ntBASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 AC138761.1-201ENST00000584393 385 ntBASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 AC027307.3-201ENST00000594262 1100 ntBASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 AC138696.2-201ENST00000607376 223 ntBASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 AC005252.2-201ENST00000624630 1141 ntBASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 AC090643.2-201ENST00000623442 2029 ntBASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PFDN4Q9NQP4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 HSPA8P5-201ENST00000456928 2069 ntBASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 AC011498.7-201ENST00000624986 2027 ntBASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 TUBB8P4-201ENST00000511806 1324 ntBASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PFDN4Q9NQP4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms