Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
NKX2-5P52952 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
NKX2-5P52952 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
NKX2-5P52952 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC12.16□□□□□ -0.46
NKX2-5P52952 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.16□□□□□ -0.46
NKX2-5P52952 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
NKX2-5P52952 AC092474.2-201ENST00000424288 719 ntBASIC12.16□□□□□ -0.46
NKX2-5P52952 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.16□□□□□ -0.46
NKX2-5P52952 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.16□□□□□ -0.46
NKX2-5P52952 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.16□□□□□ -0.46
NKX2-5P52952 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.16□□□□□ -0.46
NKX2-5P52952 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.16□□□□□ -0.46
NKX2-5P52952 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.16□□□□□ -0.46
NKX2-5P52952 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC12.16□□□□□ -0.46
NKX2-5P52952 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.16□□□□□ -0.46
NKX2-5P52952 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 CPT1B-203ENST00000395650 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
NKX2-5P52952 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
NKX2-5P52952 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
NKX2-5P52952 CLPB-201ENST00000294053 3240 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
NKX2-5P52952 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.16□□□□□ -0.46
NKX2-5P52952 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 FOXO4-202ENST00000374259 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX2-5P52952 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
NKX2-5P52952 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-5P52952 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.15□□□□□ -0.46
NKX2-5P52952 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
NKX2-5P52952 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC12.15□□□□□ -0.46
NKX2-5P52952 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
NKX2-5P52952 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-5P52952 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-5P52952 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
NKX2-5P52952 CFAP43-204ENST00000369720 2876 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 AK4P3-201ENST00000418260 669 ntBASIC12.15□□□□□ -0.46
NKX2-5P52952 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.15□□□□□ -0.46
NKX2-5P52952 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.15□□□□□ -0.46
NKX2-5P52952 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.15□□□□□ -0.46
NKX2-5P52952 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-5P52952 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 AC093827.2-201ENST00000512654 315 ntBASIC12.15□□□□□ -0.46
NKX2-5P52952 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-5P52952 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.15□□□□□ -0.46
NKX2-5P52952 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.15□□□□□ -0.46
NKX2-5P52952 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-5P52952 AC092364.2-202ENST00000597012 1073 ntBASIC12.15□□□□□ -0.46
NKX2-5P52952 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
NKX2-5P52952 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.15□□□□□ -0.46
NKX2-5P52952 AC004840.1-201ENST00000636359 365 ntBASIC12.15□□□□□ -0.46
NKX2-5P52952 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX2-5P52952 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
NKX2-5P52952 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
NKX2-5P52952 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX2-5P52952 LINC01561-201ENST00000369071 2176 ntBASIC12.15□□□□□ -0.47
NKX2-5P52952 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
NKX2-5P52952 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
NKX2-5P52952 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.47
NKX2-5P52952 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
NKX2-5P52952 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-5P52952 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-5P52952 ARMCX2-203ENST00000356824 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-5P52952 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-5P52952 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms