Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 USP17L6P-201ENST00000382470 1197 ntBASIC12□□□□□ -0.49
ANKRD55Q3KP44 AC092580.3-201ENST00000430932 139 ntBASIC12□□□□□ -0.49
ANKRD55Q3KP44 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 HMGN1P19-201ENST00000436976 333 ntBASIC12□□□□□ -0.49
ANKRD55Q3KP44 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 SPCS2P1-201ENST00000561636 679 ntBASIC12□□□□□ -0.49
ANKRD55Q3KP44 AC036164.1-201ENST00000570544 333 ntBASIC12□□□□□ -0.49
ANKRD55Q3KP44 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 AC022144.1-201ENST00000602255 1580 ntBASIC12□□□□□ -0.49
ANKRD55Q3KP44 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ANKRD55Q3KP44 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12□□□□□ -0.49
ANKRD55Q3KP44 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 FAM207CP-201ENST00000443486 507 ntBASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 AC114812.1-204ENST00000449669 728 ntBASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ANKRD55Q3KP44 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ANKRD55Q3KP44 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms