Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.61□□□□□ -0.39
DEFA3P59666 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA3P59666 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA3P59666 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA3P59666 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 AC008735.5-201ENST00000623544 497 ntBASIC12.61□□□□□ -0.39
DEFA3P59666 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
DEFA3P59666 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 AC010536.1-201ENST00000538868 2611 ntBASIC12.61□□□□□ -0.39
DEFA3P59666 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC12.61□□□□□ -0.39
DEFA3P59666 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 AC015818.9-201ENST00000591705 4582 ntBASIC12.61□□□□□ -0.39
DEFA3P59666 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
DEFA3P59666 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA3P59666 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA3P59666 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
DEFA3P59666 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
DEFA3P59666 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA3P59666 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.6□□□□□ -0.39
DEFA3P59666 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.6□□□□□ -0.39
DEFA3P59666 AL357140.3-201ENST00000639753 1983 ntBASIC12.6□□□□□ -0.39
DEFA3P59666 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC12.6□□□□□ -0.39
DEFA3P59666 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
DEFA3P59666 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
DEFA3P59666 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA3P59666 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA3P59666 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA3P59666 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.6□□□□□ -0.39
DEFA3P59666 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.6□□□□□ -0.39
DEFA3P59666 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
DEFA3P59666 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA3P59666 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.6□□□□□ -0.39
DEFA3P59666 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.6□□□□□ -0.39
DEFA3P59666 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.6□□□□□ -0.39
DEFA3P59666 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA3P59666 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
DEFA3P59666 MIR3180-1-201ENST00000580374 94 ntBASIC12.6□□□□□ -0.39
DEFA3P59666 MIR3180-3-201ENST00000584616 94 ntBASIC12.6□□□□□ -0.39
DEFA3P59666 AC027307.2-201ENST00000591252 911 ntBASIC12.6□□□□□ -0.39
DEFA3P59666 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
DEFA3P59666 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.6□□□□□ -0.39
DEFA3P59666 AC008267.7-201ENST00000624570 1194 ntBASIC12.6□□□□□ -0.39
DEFA3P59666 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
DEFA3P59666 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
DEFA3P59666 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA3P59666 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA3P59666 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.6□□□□□ -0.39
DEFA3P59666 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
DEFA3P59666 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA3P59666 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.6□□□□□ -0.39
DEFA3P59666 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
DEFA3P59666 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.59□□□□□ -0.39
DEFA3P59666 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DEFA3P59666 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
DEFA3P59666 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms