RNA–Protein interactions for RNA: ENST00000257836.3

PRRG4-201, Transcript of proline rich and Gla domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRRG4, Length 5,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRG4-201ENST00000257836 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
PRRG4-201ENST00000257836 SUPT5HO00267 1087 aaKnown RBP20.56■□□□□ 0.88
PRRG4-201ENST00000257836 EHMT2Q96KQ7 1210 aa20.26■□□□□ 0.83
PRRG4-201ENST00000257836 NISCHQ9Y2I1 1504 aa20.17■□□□□ 0.82
PRRG4-201ENST00000257836 SHROOM4Q9ULL8 1493 aa20.16■□□□□ 0.82
PRRG4-201ENST00000257836 TTBK1Q5TCY1 1321 aaPredicted RBP19.53■□□□□ 0.72
PRRG4-201ENST00000257836 FAM9AQ8IZU1 332 aaPredicted RBP19.51■□□□□ 0.71
PRRG4-201ENST00000257836 APLP2Q06481 763 aa19.41■□□□□ 0.7
PRRG4-201ENST00000257836 RANGAP1P46060 587 aaPredicted RBP19.27■□□□□ 0.68
PRRG4-201ENST00000257836 PELP1Q8IZL8 1130 aaKnown RBP19.26■□□□□ 0.67
PRRG4-201ENST00000257836 PCGF6Q9BYE7 350 aa19.23■□□□□ 0.67
PRRG4-201ENST00000257836 ATP1B4Q9UN42 357 aaPredicted RBP18.98■□□□□ 0.63
PRRG4-201ENST00000257836 TRIM41Q8WV44 630 aa18.85■□□□□ 0.61
PRRG4-201ENST00000257836 CCER1Q8TC90 406 aaPredicted RBP18.84■□□□□ 0.61
PRRG4-201ENST00000257836 UBTFP17480 764 aaKnown RBP18.74■□□□□ 0.59
PRRG4-201ENST00000257836 PPARGC1BQ86YN6 1023 aaKnown RBP18.73■□□□□ 0.59
PRRG4-201ENST00000257836 ERICH6Q7L0X2 663 aa18.69■□□□□ 0.58
PRRG4-201ENST00000257836 CENPBP07199 599 aaPredicted RBP18.68■□□□□ 0.58
PRRG4-201ENST00000257836 YTHDC1Q96MU7 727 aaKnown RBP18.66■□□□□ 0.58
PRRG4-201ENST00000257836 ZEB1P37275 1124 aaPredicted RBP18.54■□□□□ 0.56
PRRG4-201ENST00000257836 NEFLP07196 543 aa18.37■□□□□ 0.53
PRRG4-201ENST00000257836 ITGAEP38570 1179 aa18.35■□□□□ 0.53
PRRG4-201ENST00000257836 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.52
PRRG4-201ENST00000257836 CNGB1Q14028 1251 aaPredicted RBP18.26■□□□□ 0.51
PRRG4-201ENST00000257836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.22■□□□□ 0.51
PRRG4-201ENST00000257836 HNRNPUL2Q1KMD3 747 aaKnown RBP18.22■□□□□ 0.51
PRRG4-201ENST00000257836 MYT1LQ9UL68 1186 aa18.22■□□□□ 0.51
PRRG4-201ENST00000257836 LOC105371045A0A1W2PR82 267 aa18.21■□□□□ 0.51
PRRG4-201ENST00000257836 TRIM26Q12899 539 aaPredicted RBP18.13■□□□□ 0.49
PRRG4-201ENST00000257836 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
PRRG4-201ENST00000257836 HRCP23327 699 aa18.05■□□□□ 0.48
PRRG4-201ENST00000257836 MYT1Q01538 1121 aa17.95■□□□□ 0.46
PRRG4-201ENST00000257836 DAXXQ9UER7 740 aaPredicted RBP17.89■□□□□ 0.45
PRRG4-201ENST00000257836 SLC4A1APQ9BWU0 796 aaKnown RBP17.88■□□□□ 0.45
PRRG4-201ENST00000257836 FAM50AQ14320 339 aaKnown RBP17.72■□□□□ 0.43
PRRG4-201ENST00000257836 PABPN1Q86U42 306 aaKnown RBP eCLIP17.67■□□□□ 0.42
PRRG4-201ENST00000257836 NEUROD1Q13562 356 aa17.65■□□□□ 0.42
PRRG4-201ENST00000257836 DIEXFQ68CQ4 756 aaKnown RBP17.65■□□□□ 0.42
PRRG4-201ENST00000257836 TRIM52Q96A61 297 aa17.64■□□□□ 0.41
PRRG4-201ENST00000257836 CLSPNQ9HAW4 1339 aa17.62■□□□□ 0.41
PRRG4-201ENST00000257836 BCANQ96GW7 911 aa17.58■□□□□ 0.4
PRRG4-201ENST00000257836 ZNF326Q5BKZ1 582 aaKnown RBP17.56■□□□□ 0.4
PRRG4-201ENST00000257836 ZNF316A6NFI3 1004 aaPredicted RBP17.49■□□□□ 0.39
PRRG4-201ENST00000257836 FBLN2P98095 1184 aa17.46■□□□□ 0.39
PRRG4-201ENST00000257836 ARID3CA6NKF2 412 aa17.45■□□□□ 0.38
PRRG4-201ENST00000257836 BCL11AQ9H165 835 aa17.45■□□□□ 0.38
PRRG4-201ENST00000257836 RTL5Q5HYW3 569 aaPredicted RBP17.43■□□□□ 0.38
PRRG4-201ENST00000257836 ABCC9O60706 1549 aa17.43■□□□□ 0.38
PRRG4-201ENST00000257836 P3H3Q8IVL6 736 aa17.37■□□□□ 0.37
PRRG4-201ENST00000257836 CCDC180Q9P1Z9 1646 aa17.35■□□□□ 0.37
PRRG4-201ENST00000257836 GTF3C3Q9Y5Q9 886 aa17.35■□□□□ 0.37
PRRG4-201ENST00000257836 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
PRRG4-201ENST00000257836 ANP32CO43423 234 aa17.29■□□□□ 0.36
PRRG4-201ENST00000257836 ZNF777Q9ULD5 760 aaPredicted RBP17.19■□□□□ 0.34
PRRG4-201ENST00000257836 CANXP27824 592 aaKnown RBP17.16■□□□□ 0.34
PRRG4-201ENST00000257836 ZBTB47Q9UFB7 747 aaPredicted RBP17.16■□□□□ 0.34
PRRG4-201ENST00000257836 CDK11AQ9UQ88 783 aaPredicted RBP17.15■□□□□ 0.34
PRRG4-201ENST00000257836 PLPPR3Q6T4P5 718 aa17.06■□□□□ 0.32
PRRG4-201ENST00000257836 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
PRRG4-201ENST00000257836 NPM2Q86SE8 214 aaKnown RBP17.03■□□□□ 0.32
PRRG4-201ENST00000257836 NEFMP07197 916 aa16.99■□□□□ 0.31
PRRG4-201ENST00000257836 CHGAP10645 457 aaKnown RBP16.98■□□□□ 0.31
PRRG4-201ENST00000257836 SALL2Q9Y467 1007 aaPredicted RBP16.96■□□□□ 0.31
PRRG4-201ENST00000257836 ACIN1Q9UKV3 1341 aaKnown RBP16.95■□□□□ 0.3
PRRG4-201ENST00000257836 FKBP8Q14318 412 aa16.89■□□□□ 0.3
PRRG4-201ENST00000257836 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.29
PRRG4-201ENST00000257836 DDX10Q13206 875 aaKnown RBP16.88■□□□□ 0.29
PRRG4-201ENST00000257836 CHIC2Q9UKJ5 165 aa16.88■□□□□ 0.29
PRRG4-201ENST00000257836 ANP32AP39687 249 aaKnown RBP16.86■□□□□ 0.29
PRRG4-201ENST00000257836 HNRNPUQ00839 825 aaKnown RBP eCLIP16.85■□□□□ 0.29
PRRG4-201ENST00000257836 STAG3Q9UJ98 1225 aa16.85■□□□□ 0.29
PRRG4-201ENST00000257836 ESF1Q9H501 851 aaKnown RBP16.84■□□□□ 0.29
PRRG4-201ENST00000257836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRRG4-201ENST00000257836 SENP3Q9H4L4 574 aaPredicted RBP16.83■□□□□ 0.28
PRRG4-201ENST00000257836 TONSLQ96HA7 1378 aa16.82■□□□□ 0.28
PRRG4-201ENST00000257836 ZCCHC6Q5VYS8 1495 aaKnown RBP16.79■□□□□ 0.28
PRRG4-201ENST00000257836 HIRIP3Q9BW71 556 aaPredicted RBP16.78■□□□□ 0.28
PRRG4-201ENST00000257836 KDM2AQ9Y2K7 1162 aa16.75■□□□□ 0.27
PRRG4-201ENST00000257836 HSP90AA1P07900 732 aaKnown RBP16.73■□□□□ 0.27
PRRG4-201ENST00000257836 PLEKHG5O94827 1062 aa16.7■□□□□ 0.26
PRRG4-201ENST00000257836 IRX6P78412 446 aaPredicted RBP16.7■□□□□ 0.26
PRRG4-201ENST00000257836 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
PRRG4-201ENST00000257836 ARXQ96QS3 562 aa16.68■□□□□ 0.26
PRRG4-201ENST00000257836 SENP3-EIF4A1A0A087X0R7 540 aa16.68■□□□□ 0.26
PRRG4-201ENST00000257836 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
PRRG4-201ENST00000257836 EIF5BO60841 1220 aaKnown RBP16.67■□□□□ 0.26
PRRG4-201ENST00000257836 TMC1Q8TDI8 760 aa16.67■□□□□ 0.26
PRRG4-201ENST00000257836 NPM1P06748 294 aaKnown RBP eCLIP16.66■□□□□ 0.26
PRRG4-201ENST00000257836 NBR1Q14596 966 aa16.63■□□□□ 0.25
PRRG4-201ENST00000257836 SCAF1Q9H7N4 1312 aaKnown RBP16.62■□□□□ 0.25
PRRG4-201ENST00000257836 CCDC136Q96JN2 1154 aa16.62■□□□□ 0.25
PRRG4-201ENST00000257836 NACADO15069 1562 aa16.61■□□□□ 0.25
PRRG4-201ENST00000257836 MRS2Q9HD23 443 aa16.61■□□□□ 0.25
PRRG4-201ENST00000257836 UPF2Q9HAU5 1272 aaKnown RBP16.59■□□□□ 0.25
PRRG4-201ENST00000257836 A0A0G2JS52 829 aa16.58■□□□□ 0.24
PRRG4-201ENST00000257836 WDR43Q15061 677 aaKnown RBP eCLIP16.57■□□□□ 0.24
PRRG4-201ENST00000257836 MIER1Q8N108 512 aa16.57■□□□□ 0.24
PRRG4-201ENST00000257836 RRP7BPQ9NSQ0 103 aa16.56■□□□□ 0.24
PRRG4-201ENST00000257836 ZBTB7CA1YPR0 619 aa16.55■□□□□ 0.24
PRRG4-201ENST00000257836 ANP32BQ92688 251 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms