RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 DCAF8L2P0C7V8 631 aa22.05■■□□□ 1.12
TNFAIP3-206ENST00000612899 NISCHQ9Y2I1 1504 aa21.38■■□□□ 1.01
TNFAIP3-206ENST00000612899 SUPT5HO00267 1087 aaKnown RBP21.03■□□□□ 0.96
TNFAIP3-206ENST00000612899 SHROOM4Q9ULL8 1493 aa20.74■□□□□ 0.91
TNFAIP3-206ENST00000612899 EHMT2Q96KQ7 1210 aa20.28■□□□□ 0.84
TNFAIP3-206ENST00000612899 MYT1Q01538 1121 aa20.08■□□□□ 0.81
TNFAIP3-206ENST00000612899 PELP1Q8IZL8 1130 aaKnown RBP20.08■□□□□ 0.81
TNFAIP3-206ENST00000612899 FAM9AQ8IZU1 332 aaPredicted RBP19.83■□□□□ 0.76
TNFAIP3-206ENST00000612899 APLP2Q06481 763 aa19.64■□□□□ 0.74
TNFAIP3-206ENST00000612899 PCGF6Q9BYE7 350 aa19.58■□□□□ 0.72
TNFAIP3-206ENST00000612899 TTBK1Q5TCY1 1321 aaPredicted RBP19.57■□□□□ 0.72
TNFAIP3-206ENST00000612899 TRIM41Q8WV44 630 aa19.42■□□□□ 0.7
TNFAIP3-206ENST00000612899 RANGAP1P46060 587 aaPredicted RBP19.37■□□□□ 0.69
TNFAIP3-206ENST00000612899 UBTFP17480 764 aaKnown RBP19.14■□□□□ 0.65
TNFAIP3-206ENST00000612899 CCER1Q8TC90 406 aaPredicted RBP19.1■□□□□ 0.65
TNFAIP3-206ENST00000612899 ATP1B4Q9UN42 357 aaPredicted RBP19.08■□□□□ 0.65
TNFAIP3-206ENST00000612899 ZEB1P37275 1124 aaPredicted RBP19■□□□□ 0.63
TNFAIP3-206ENST00000612899 PPARGC1BQ86YN6 1023 aaKnown RBP18.97■□□□□ 0.63
TNFAIP3-206ENST00000612899 CENPBP07199 599 aaPredicted RBP18.84■□□□□ 0.61
TNFAIP3-206ENST00000612899 LOC105371045A0A1W2PR82 267 aa18.79■□□□□ 0.6
TNFAIP3-206ENST00000612899 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
TNFAIP3-206ENST00000612899 TRIM26Q12899 539 aaPredicted RBP18.71■□□□□ 0.59
TNFAIP3-206ENST00000612899 YTHDC1Q96MU7 727 aaKnown RBP18.63■□□□□ 0.57
TNFAIP3-206ENST00000612899 ITGAEP38570 1179 aa18.55■□□□□ 0.56
TNFAIP3-206ENST00000612899 HRCP23327 699 aa18.53■□□□□ 0.56
TNFAIP3-206ENST00000612899 HNRNPUL2Q1KMD3 747 aaKnown RBP18.46■□□□□ 0.55
TNFAIP3-206ENST00000612899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.41■□□□□ 0.54
TNFAIP3-206ENST00000612899 ERICH6Q7L0X2 663 aa18.41■□□□□ 0.54
TNFAIP3-206ENST00000612899 NEFLP07196 543 aa18.4■□□□□ 0.54
TNFAIP3-206ENST00000612899 ABCC9O60706 1549 aa18.39■□□□□ 0.54
TNFAIP3-206ENST00000612899 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.53
TNFAIP3-206ENST00000612899 POLR3GLQ9BT43 218 aa18.23■□□□□ 0.51
TNFAIP3-206ENST00000612899 MYT1LQ9UL68 1186 aa18.22■□□□□ 0.51
TNFAIP3-206ENST00000612899 CNGB1Q14028 1251 aaPredicted RBP18.14■□□□□ 0.49
TNFAIP3-206ENST00000612899 FAM50AQ14320 339 aaKnown RBP18.04■□□□□ 0.48
TNFAIP3-206ENST00000612899 DIEXFQ68CQ4 756 aaKnown RBP18.01■□□□□ 0.47
TNFAIP3-206ENST00000612899 NEUROD1Q13562 356 aa17.89■□□□□ 0.45
TNFAIP3-206ENST00000612899 TRIM52Q96A61 297 aa17.89■□□□□ 0.45
TNFAIP3-206ENST00000612899 CSRNP3Q8WYN3 585 aa17.84■□□□□ 0.45
TNFAIP3-206ENST00000612899 SLC4A1APQ9BWU0 796 aaKnown RBP17.79■□□□□ 0.44
TNFAIP3-206ENST00000612899 FBLN2P98095 1184 aa17.78■□□□□ 0.44
TNFAIP3-206ENST00000612899 P3H3Q8IVL6 736 aa17.78■□□□□ 0.44
TNFAIP3-206ENST00000612899 DAXXQ9UER7 740 aaPredicted RBP17.73■□□□□ 0.43
TNFAIP3-206ENST00000612899 ZNF326Q5BKZ1 582 aaKnown RBP17.7■□□□□ 0.42
TNFAIP3-206ENST00000612899 ARID3CA6NKF2 412 aa17.69■□□□□ 0.42
TNFAIP3-206ENST00000612899 ZCCHC6Q5VYS8 1495 aaKnown RBP17.68■□□□□ 0.42
TNFAIP3-206ENST00000612899 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
TNFAIP3-206ENST00000612899 ZNF316A6NFI3 1004 aaPredicted RBP17.63■□□□□ 0.41
TNFAIP3-206ENST00000612899 GTF3C3Q9Y5Q9 886 aa17.6■□□□□ 0.41
TNFAIP3-206ENST00000612899 ANP32CO43423 234 aa17.58■□□□□ 0.4
TNFAIP3-206ENST00000612899 BCANQ96GW7 911 aa17.58■□□□□ 0.4
TNFAIP3-206ENST00000612899 CLSPNQ9HAW4 1339 aa17.52■□□□□ 0.39
TNFAIP3-206ENST00000612899 ZNF777Q9ULD5 760 aaPredicted RBP17.49■□□□□ 0.39
TNFAIP3-206ENST00000612899 CDK11AQ9UQ88 783 aaPredicted RBP17.38■□□□□ 0.37
TNFAIP3-206ENST00000612899 DCAF1Q9Y4B6 1507 aa17.36■□□□□ 0.37
TNFAIP3-206ENST00000612899 ACIN1Q9UKV3 1341 aaKnown RBP17.36■□□□□ 0.37
TNFAIP3-206ENST00000612899 RTL5Q5HYW3 569 aaPredicted RBP17.34■□□□□ 0.37
TNFAIP3-206ENST00000612899 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
TNFAIP3-206ENST00000612899 TONSLQ96HA7 1378 aa17.27■□□□□ 0.35
TNFAIP3-206ENST00000612899 CHIC2Q9UKJ5 165 aa17.26■□□□□ 0.35
TNFAIP3-206ENST00000612899 DDX10Q13206 875 aaKnown RBP17.24■□□□□ 0.35
TNFAIP3-206ENST00000612899 RSF1Q96T23 1441 aaPredicted RBP17.23■□□□□ 0.35
TNFAIP3-206ENST00000612899 MYO15BQ96JP2 1530 aa17.2■□□□□ 0.34
TNFAIP3-206ENST00000612899 BCL11AQ9H165 835 aa17.18■□□□□ 0.34
TNFAIP3-206ENST00000612899 CANXP27824 592 aaKnown RBP17.17■□□□□ 0.34
TNFAIP3-206ENST00000612899 CLIP1P30622 1438 aa17.17■□□□□ 0.34
TNFAIP3-206ENST00000612899 CHGAP10645 457 aaKnown RBP17.15■□□□□ 0.34
TNFAIP3-206ENST00000612899 SLC24A1O60721 1099 aa17.13■□□□□ 0.33
TNFAIP3-206ENST00000612899 HNRNPUQ00839 825 aaKnown RBP eCLIP17.13■□□□□ 0.33
TNFAIP3-206ENST00000612899 ZBTB47Q9UFB7 747 aaPredicted RBP17.12■□□□□ 0.33
TNFAIP3-206ENST00000612899 MTUS2Q5JR59 1369 aa17.12■□□□□ 0.33
TNFAIP3-206ENST00000612899 NEFMP07197 916 aa17.11■□□□□ 0.33
TNFAIP3-206ENST00000612899 FAM9BQ8IZU0 186 aa17.11■□□□□ 0.33
TNFAIP3-206ENST00000612899 FKBP8Q14318 412 aa17.1■□□□□ 0.33
TNFAIP3-206ENST00000612899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.339e-8■■□□□ 12.2
TNFAIP3-206ENST00000612899 HIRIP3Q9BW71 556 aaPredicted RBP17.08■□□□□ 0.32
TNFAIP3-206ENST00000612899 SCAF1Q9H7N4 1312 aaKnown RBP17.07■□□□□ 0.32
TNFAIP3-206ENST00000612899 RB1CC1Q8TDY2 1594 aa17.06■□□□□ 0.32
TNFAIP3-206ENST00000612899 TSPY4P0CV99 314 aa17.06■□□□□ 0.32
TNFAIP3-206ENST00000612899 TSPY10P0CW01 314 aa17.06■□□□□ 0.32
TNFAIP3-206ENST00000612899 CHMP7Q8WUX9 453 aaPredicted RBP17.06■□□□□ 0.32
TNFAIP3-206ENST00000612899 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
TNFAIP3-206ENST00000612899 NPM1P06748 294 aaKnown RBP eCLIP17.05■□□□□ 0.32
TNFAIP3-206ENST00000612899 CEP162Q5TB80 1403 aa17.04■□□□□ 0.32
TNFAIP3-206ENST00000612899 GLIPR1L2Q4G1C9 344 aa17.04■□□□□ 0.32
TNFAIP3-206ENST00000612899 KDM2AQ9Y2K7 1162 aa17.03■□□□□ 0.32
TNFAIP3-206ENST00000612899 ESF1Q9H501 851 aaKnown RBP17.02■□□□□ 0.32
TNFAIP3-206ENST00000612899 MIER1Q8N108 512 aa17.02■□□□□ 0.32
TNFAIP3-206ENST00000612899 WRNQ14191 1432 aaPredicted RBP eCLIP17.02■□□□□ 0.31
TNFAIP3-206ENST00000612899 RRP7BPQ9NSQ0 103 aa17.01■□□□□ 0.31
TNFAIP3-206ENST00000612899 STAG3Q9UJ98 1225 aa17.01■□□□□ 0.31
TNFAIP3-206ENST00000612899 EEA1Q15075 1411 aa16.99■□□□□ 0.31
TNFAIP3-206ENST00000612899 GOLGA3Q08378 1498 aa16.98■□□□□ 0.31
TNFAIP3-206ENST00000612899 NPM2Q86SE8 214 aaKnown RBP16.97■□□□□ 0.31
TNFAIP3-206ENST00000612899 TMC1Q8TDI8 760 aa16.97■□□□□ 0.31
TNFAIP3-206ENST00000612899 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.31
TNFAIP3-206ENST00000612899 ANP32AP39687 249 aaKnown RBP16.95■□□□□ 0.3
TNFAIP3-206ENST00000612899 MRS2Q9HD23 443 aa16.94■□□□□ 0.3
TNFAIP3-206ENST00000612899 NACADO15069 1562 aa16.93■□□□□ 0.3
TNFAIP3-206ENST00000612899 BAZ1BQ9UIG0 1483 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms