RNA–Protein interactions for RNA: ENST00000389428.7

SEMA6D-206, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 5,874 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-206ENST00000389428 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
SEMA6D-206ENST00000389428 PELP1Q8IZL8 1130 aaKnown RBP19.4■□□□□ 0.7
SEMA6D-206ENST00000389428 SUPT5HO00267 1087 aaKnown RBP18.98■□□□□ 0.63
SEMA6D-206ENST00000389428 APLP2Q06481 763 aa18.76■□□□□ 0.59
SEMA6D-206ENST00000389428 FAM9AQ8IZU1 332 aaPredicted RBP18.73■□□□□ 0.59
SEMA6D-206ENST00000389428 EHMT2Q96KQ7 1210 aa18.61■□□□□ 0.57
SEMA6D-206ENST00000389428 ERICH6Q7L0X2 663 aa18.58■□□□□ 0.56
SEMA6D-206ENST00000389428 CCER1Q8TC90 406 aaPredicted RBP18.52■□□□□ 0.56
SEMA6D-206ENST00000389428 SHROOM4Q9ULL8 1493 aa18.47■□□□□ 0.55
SEMA6D-206ENST00000389428 CENPBP07199 599 aaPredicted RBP18.22■□□□□ 0.51
SEMA6D-206ENST00000389428 NISCHQ9Y2I1 1504 aa18.21■□□□□ 0.51
SEMA6D-206ENST00000389428 TTBK1Q5TCY1 1321 aaPredicted RBP18.05■□□□□ 0.48
SEMA6D-206ENST00000389428 ZEB1P37275 1124 aaPredicted RBP18.05■□□□□ 0.48
SEMA6D-206ENST00000389428 NEFLP07196 543 aa18.01■□□□□ 0.47
SEMA6D-206ENST00000389428 PCGF6Q9BYE7 350 aa17.95■□□□□ 0.46
SEMA6D-206ENST00000389428 MYT1Q01538 1121 aa17.94■□□□□ 0.46
SEMA6D-206ENST00000389428 ATP1B4Q9UN42 357 aaPredicted RBP17.92■□□□□ 0.46
SEMA6D-206ENST00000389428 RANGAP1P46060 587 aaPredicted RBP17.85■□□□□ 0.45
SEMA6D-206ENST00000389428 DAXXQ9UER7 740 aaPredicted RBP17.72■□□□□ 0.43
SEMA6D-206ENST00000389428 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
SEMA6D-206ENST00000389428 UBTFP17480 764 aaKnown RBP17.62■□□□□ 0.41
SEMA6D-206ENST00000389428 YTHDC1Q96MU7 727 aaKnown RBP17.6■□□□□ 0.41
SEMA6D-206ENST00000389428 MYT1LQ9UL68 1186 aa17.47■□□□□ 0.39
SEMA6D-206ENST00000389428 POLR3GLQ9BT43 218 aa17.34■□□□□ 0.37
SEMA6D-206ENST00000389428 ZNF316A6NFI3 1004 aaPredicted RBP17.27■□□□□ 0.36
SEMA6D-206ENST00000389428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
SEMA6D-206ENST00000389428 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
SEMA6D-206ENST00000389428 RTL5Q5HYW3 569 aaPredicted RBP17.19■□□□□ 0.34
SEMA6D-206ENST00000389428 SLC4A1APQ9BWU0 796 aaKnown RBP17.17■□□□□ 0.34
SEMA6D-206ENST00000389428 CLSPNQ9HAW4 1339 aa17.13■□□□□ 0.33
SEMA6D-206ENST00000389428 TRIM26Q12899 539 aaPredicted RBP17.13■□□□□ 0.33
SEMA6D-206ENST00000389428 ITGAEP38570 1179 aa17.11■□□□□ 0.33
SEMA6D-206ENST00000389428 PPARGC1BQ86YN6 1023 aaKnown RBP17.06■□□□□ 0.32
SEMA6D-206ENST00000389428 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
SEMA6D-206ENST00000389428 CNGB1Q14028 1251 aaPredicted RBP16.99■□□□□ 0.31
SEMA6D-206ENST00000389428 ZBTB47Q9UFB7 747 aaPredicted RBP16.94■□□□□ 0.3
SEMA6D-206ENST00000389428 HRCP23327 699 aa16.9■□□□□ 0.3
SEMA6D-206ENST00000389428 TRIM52Q96A61 297 aa16.75■□□□□ 0.27
SEMA6D-206ENST00000389428 FAM50AQ14320 339 aaKnown RBP16.72■□□□□ 0.27
SEMA6D-206ENST00000389428 CANXP27824 592 aaKnown RBP16.7■□□□□ 0.26
SEMA6D-206ENST00000389428 NEFMP07197 916 aa16.67■□□□□ 0.26
SEMA6D-206ENST00000389428 CDK11AQ9UQ88 783 aaPredicted RBP16.67■□□□□ 0.26
SEMA6D-206ENST00000389428 DIEXFQ68CQ4 756 aaKnown RBP16.65■□□□□ 0.26
SEMA6D-206ENST00000389428 SLC24A1O60721 1099 aa16.65■□□□□ 0.26
SEMA6D-206ENST00000389428 ANP32CO43423 234 aa16.62■□□□□ 0.25
SEMA6D-206ENST00000389428 NEUROD1Q13562 356 aa16.56■□□□□ 0.24
SEMA6D-206ENST00000389428 ZNF326Q5BKZ1 582 aaKnown RBP16.53■□□□□ 0.24
SEMA6D-206ENST00000389428 BCANQ96GW7 911 aa16.52■□□□□ 0.24
SEMA6D-206ENST00000389428 ANP32BQ92688 251 aaKnown RBP16.49■□□□□ 0.23
SEMA6D-206ENST00000389428 ANP32AP39687 249 aaKnown RBP16.47■□□□□ 0.23
SEMA6D-206ENST00000389428 LOC105371045A0A1W2PR82 267 aa16.47■□□□□ 0.23
SEMA6D-206ENST00000389428 BCL11AQ9H165 835 aa16.46■□□□□ 0.23
SEMA6D-206ENST00000389428 HSP90AA1P07900 732 aaKnown RBP16.31■□□□□ 0.2
SEMA6D-206ENST00000389428 GTF3C3Q9Y5Q9 886 aa16.29■□□□□ 0.2
SEMA6D-206ENST00000389428 UPF2Q9HAU5 1272 aaKnown RBP16.29■□□□□ 0.2
SEMA6D-206ENST00000389428 FBLN2P98095 1184 aa16.29■□□□□ 0.2
SEMA6D-206ENST00000389428 ESF1Q9H501 851 aaKnown RBP16.29■□□□□ 0.2
SEMA6D-206ENST00000389428 NPM2Q86SE8 214 aaKnown RBP16.27■□□□□ 0.19
SEMA6D-206ENST00000389428 GLIPR1L2Q4G1C9 344 aa16.25■□□□□ 0.19
SEMA6D-206ENST00000389428 CDK11BP21127 795 aaKnown RBP16.2■□□□□ 0.18
SEMA6D-206ENST00000389428 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
SEMA6D-206ENST00000389428 EIF5BO60841 1220 aaKnown RBP16.14■□□□□ 0.17
SEMA6D-206ENST00000389428 ZNF777Q9ULD5 760 aaPredicted RBP16.12■□□□□ 0.17
SEMA6D-206ENST00000389428 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.1■□□□□ 0.17
SEMA6D-206ENST00000389428 CHGAP10645 457 aaKnown RBP16.06■□□□□ 0.16
SEMA6D-206ENST00000389428 PABPN1Q86U42 306 aaKnown RBP eCLIP16.05■□□□□ 0.16
SEMA6D-206ENST00000389428 TONSLQ96HA7 1378 aa16.02■□□□□ 0.16
SEMA6D-206ENST00000389428 ARID3CA6NKF2 412 aa16.02■□□□□ 0.16
SEMA6D-206ENST00000389428 MYH16Q9H6N6 1097 aa16.01■□□□□ 0.15
SEMA6D-206ENST00000389428 ACIN1Q9UKV3 1341 aaKnown RBP15.99■□□□□ 0.15
SEMA6D-206ENST00000389428 P3H3Q8IVL6 736 aa15.99■□□□□ 0.15
SEMA6D-206ENST00000389428 FKBP8Q14318 412 aa15.97■□□□□ 0.15
SEMA6D-206ENST00000389428 WDR43Q15061 677 aaKnown RBP eCLIP15.97■□□□□ 0.15
SEMA6D-206ENST00000389428 NPM1P06748 294 aaKnown RBP eCLIP15.97■□□□□ 0.15
SEMA6D-206ENST00000389428 ABCC9O60706 1549 aa15.95■□□□□ 0.14
SEMA6D-206ENST00000389428 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
SEMA6D-206ENST00000389428 NCLP19338 710 aaKnown RBP15.93■□□□□ 0.14
SEMA6D-206ENST00000389428 HNRNPUQ00839 825 aaKnown RBP eCLIP15.91■□□□□ 0.14
SEMA6D-206ENST00000389428 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
SEMA6D-206ENST00000389428 FAM9BQ8IZU0 186 aa15.89■□□□□ 0.14
SEMA6D-206ENST00000389428 CCDC136Q96JN2 1154 aa15.89■□□□□ 0.13
SEMA6D-206ENST00000389428 TMC1Q8TDI8 760 aa15.86■□□□□ 0.13
SEMA6D-206ENST00000389428 DDRGK1Q96HY6 314 aa15.85■□□□□ 0.13
SEMA6D-206ENST00000389428 BECN1Q14457 450 aa15.84■□□□□ 0.13
SEMA6D-206ENST00000389428 ANP32EQ9BTT0 268 aa15.84■□□□□ 0.13
SEMA6D-206ENST00000389428 A0A0G2JS52 829 aa15.83■□□□□ 0.12
SEMA6D-206ENST00000389428 ARXQ96QS3 562 aa15.83■□□□□ 0.12
SEMA6D-206ENST00000389428 GOLGA6L22H0YM25 854 aa15.82■□□□□ 0.12
SEMA6D-206ENST00000389428 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
SEMA6D-206ENST00000389428 NBR1Q14596 966 aa15.81■□□□□ 0.12
SEMA6D-206ENST00000389428 ZRSR1Q15695 479 aaKnown RBP15.8■□□□□ 0.12
SEMA6D-206ENST00000389428 SALL2Q9Y467 1007 aaPredicted RBP15.8■□□□□ 0.12
SEMA6D-206ENST00000389428 TRIM44Q96DX7 344 aaPredicted RBP15.79■□□□□ 0.12
SEMA6D-206ENST00000389428 CASC1Q6TDU7 716 aa15.78■□□□□ 0.12
SEMA6D-206ENST00000389428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.78■□□□□ 0.12
SEMA6D-206ENST00000389428 TNNT2P45379 298 aaPredicted RBP15.78■□□□□ 0.12
SEMA6D-206ENST00000389428 ZBTB7CA1YPR0 619 aa15.77■□□□□ 0.12
SEMA6D-206ENST00000389428 DDX10Q13206 875 aaKnown RBP15.72■□□□□ 0.11
SEMA6D-206ENST00000389428 C14orf37Q86TY3 774 aa15.71■□□□□ 0.11
SEMA6D-206ENST00000389428 MRS2Q9HD23 443 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms