RNA–Protein interactions for RNA: ENST00000229729.10

SLC44A4-202, Transcript of solute carrier family 44 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC44A4, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4-202ENST00000229729 NISCHQ9Y2I1 1504 aa24.36■■□□□ 1.49
SLC44A4-202ENST00000229729 HRCP23327 699 aa21.5■■□□□ 1.03
SLC44A4-202ENST00000229729 SHROOM4Q9ULL8 1493 aa21.04■□□□□ 0.96
SLC44A4-202ENST00000229729 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
SLC44A4-202ENST00000229729 PELP1Q8IZL8 1130 aaKnown RBP20.93■□□□□ 0.94
SLC44A4-202ENST00000229729 PCGF6Q9BYE7 350 aa20.92■□□□□ 0.94
SLC44A4-202ENST00000229729 MYO15BQ96JP2 1530 aa20.92■□□□□ 0.94
SLC44A4-202ENST00000229729 PPARGC1BQ86YN6 1023 aaKnown RBP20.86■□□□□ 0.93
SLC44A4-202ENST00000229729 CHIC1Q5VXU3 224 aa20.79■□□□□ 0.92
SLC44A4-202ENST00000229729 CCDC180Q9P1Z9 1646 aa20.75■□□□□ 0.91
SLC44A4-202ENST00000229729 ZCCHC6Q5VYS8 1495 aaKnown RBP20.68■□□□□ 0.9
SLC44A4-202ENST00000229729 DCAF1Q9Y4B6 1507 aa20.67■□□□□ 0.9
SLC44A4-202ENST00000229729 TRIM26Q12899 539 aaPredicted RBP20.38■□□□□ 0.85
SLC44A4-202ENST00000229729 ZEB1P37275 1124 aaPredicted RBP20.32■□□□□ 0.84
SLC44A4-202ENST00000229729 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.84
SLC44A4-202ENST00000229729 MYT1Q01538 1121 aa20.19■□□□□ 0.82
SLC44A4-202ENST00000229729 LOC105371045A0A1W2PR82 267 aa20.17■□□□□ 0.82
SLC44A4-202ENST00000229729 ACIN1Q9UKV3 1341 aaKnown RBP19.84■□□□□ 0.77
SLC44A4-202ENST00000229729 DCAF8L2P0C7V8 631 aa19.8■□□□□ 0.76
SLC44A4-202ENST00000229729 NEUROD1Q13562 356 aa19.7■□□□□ 0.74
SLC44A4-202ENST00000229729 CENPBP07199 599 aaPredicted RBP19.64■□□□□ 0.73
SLC44A4-202ENST00000229729 GTF3C3Q9Y5Q9 886 aa19.61■□□□□ 0.73
SLC44A4-202ENST00000229729 ABCC9O60706 1549 aa19.57■□□□□ 0.72
SLC44A4-202ENST00000229729 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
SLC44A4-202ENST00000229729 DIEXFQ68CQ4 756 aaKnown RBP19.46■□□□□ 0.71
SLC44A4-202ENST00000229729 CCER1Q8TC90 406 aaPredicted RBP19.4■□□□□ 0.7
SLC44A4-202ENST00000229729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.37■□□□□ 0.69
SLC44A4-202ENST00000229729 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
SLC44A4-202ENST00000229729 RSF1Q96T23 1441 aaPredicted RBP19.32■□□□□ 0.68
SLC44A4-202ENST00000229729 SCRIBQ14160 1630 aa19.3■□□□□ 0.68
SLC44A4-202ENST00000229729 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
SLC44A4-202ENST00000229729 EHMT2Q96KQ7 1210 aa19.16■□□□□ 0.66
SLC44A4-202ENST00000229729 ZNF316A6NFI3 1004 aaPredicted RBP19.11■□□□□ 0.65
SLC44A4-202ENST00000229729 NACADO15069 1562 aa19.09■□□□□ 0.65
SLC44A4-202ENST00000229729 WRNQ14191 1432 aaPredicted RBP eCLIP19.02■□□□□ 0.64
SLC44A4-202ENST00000229729 YTHDC1Q96MU7 727 aaKnown RBP19.02■□□□□ 0.64
SLC44A4-202ENST00000229729 TTBK1Q5TCY1 1321 aaPredicted RBP18.96■□□□□ 0.63
SLC44A4-202ENST00000229729 MIER1Q8N108 512 aa18.91■□□□□ 0.62
SLC44A4-202ENST00000229729 CLSPNQ9HAW4 1339 aa18.9■□□□□ 0.62
SLC44A4-202ENST00000229729 CECR2Q9BXF3 1484 aa18.9■□□□□ 0.62
SLC44A4-202ENST00000229729 MROH2BQ7Z745 1585 aa18.9■□□□□ 0.62
SLC44A4-202ENST00000229729 CEP162Q5TB80 1403 aa18.81■□□□□ 0.6
SLC44A4-202ENST00000229729 BAZ1AQ9NRL2 1556 aaPredicted RBP18.8■□□□□ 0.6
SLC44A4-202ENST00000229729 WIZO95785 1651 aa18.8■□□□□ 0.6
SLC44A4-202ENST00000229729 EIF4G1Q04637 1599 aaKnown RBP18.78■□□□□ 0.6
SLC44A4-202ENST00000229729 ANP32EQ9BTT0 268 aa18.73■□□□□ 0.59
SLC44A4-202ENST00000229729 TNIKQ9UKE5 1360 aa18.72■□□□□ 0.59
SLC44A4-202ENST00000229729 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
SLC44A4-202ENST00000229729 BCL11AQ9H165 835 aa18.66■□□□□ 0.58
SLC44A4-202ENST00000229729 TSHZ2Q9NRE2 1034 aa18.63■□□□□ 0.57
SLC44A4-202ENST00000229729 TOP2AP11388 1531 aaKnown RBP18.6■□□□□ 0.57
SLC44A4-202ENST00000229729 EEA1Q15075 1411 aa18.59■□□□□ 0.57
SLC44A4-202ENST00000229729 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.56
SLC44A4-202ENST00000229729 SMARCA4P51532 1647 aa18.54■□□□□ 0.56
SLC44A4-202ENST00000229729 ABCC8Q09428 1581 aa18.53■□□□□ 0.56
SLC44A4-202ENST00000229729 HNRNPUL2Q1KMD3 747 aaKnown RBP18.51■□□□□ 0.55
SLC44A4-202ENST00000229729 SOGA1O94964 1423 aa18.5■□□□□ 0.55
SLC44A4-202ENST00000229729 GOLGA3Q08378 1498 aa18.49■□□□□ 0.55
SLC44A4-202ENST00000229729 UBTFP17480 764 aaKnown RBP18.47■□□□□ 0.55
SLC44A4-202ENST00000229729 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
SLC44A4-202ENST00000229729 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
SLC44A4-202ENST00000229729 UNC13AQ9UPW8 1703 aa18.44■□□□□ 0.54
SLC44A4-202ENST00000229729 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
SLC44A4-202ENST00000229729 VPS8Q8N3P4 1428 aa18.33■□□□□ 0.52
SLC44A4-202ENST00000229729 CEP164Q9UPV0 1460 aa18.31■□□□□ 0.52
SLC44A4-202ENST00000229729 DHX57Q6P158 1386 aaKnown RBP18.3■□□□□ 0.52
SLC44A4-202ENST00000229729 CLIP1P30622 1438 aa18.3■□□□□ 0.52
SLC44A4-202ENST00000229729 KIF21BO75037 1637 aa18.29■□□□□ 0.52
SLC44A4-202ENST00000229729 APLP2Q06481 763 aa18.27■□□□□ 0.52
SLC44A4-202ENST00000229729 PEG3Q9GZU2 1588 aa18.25■□□□□ 0.51
SLC44A4-202ENST00000229729 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
SLC44A4-202ENST00000229729 BICRAQ9NZM4 1560 aa18.19■□□□□ 0.5
SLC44A4-202ENST00000229729 RBM19Q9Y4C8 960 aaKnown RBP18.19■□□□□ 0.5
SLC44A4-202ENST00000229729 BCANQ96GW7 911 aa18.18■□□□□ 0.5
SLC44A4-202ENST00000229729 FKBP8Q14318 412 aa18.17■□□□□ 0.5
SLC44A4-202ENST00000229729 NEFLP07196 543 aa18.11■□□□□ 0.49
SLC44A4-202ENST00000229729 KCNH8Q96L42 1107 aa18.09■□□□□ 0.49
SLC44A4-202ENST00000229729 CUX2O14529 1486 aa18.07■□□□□ 0.48
SLC44A4-202ENST00000229729 SYNJ1O43426 1573 aa18.05■□□□□ 0.48
SLC44A4-202ENST00000229729 RAPGEF2Q9Y4G8 1499 aa18.02■□□□□ 0.48
SLC44A4-202ENST00000229729 RRBP1Q9P2E9 1410 aaKnown RBP18.02■□□□□ 0.47
SLC44A4-202ENST00000229729 MSH5O43196 834 aa17.98■□□□□ 0.47
SLC44A4-202ENST00000229729 FANCIQ9NVI1 1328 aa17.98■□□□□ 0.47
SLC44A4-202ENST00000229729 ATAD2BQ9ULI0 1458 aa17.98■□□□□ 0.47
SLC44A4-202ENST00000229729 PABPN1Q86U42 306 aaKnown RBP eCLIP17.96■□□□□ 0.47
SLC44A4-202ENST00000229729 MYT1LQ9UL68 1186 aa17.95■□□□□ 0.46
SLC44A4-202ENST00000229729 CCER2I3L3R5 266 aa17.92■□□□□ 0.46
SLC44A4-202ENST00000229729 ERICH6Q7L0X2 663 aa17.91■□□□□ 0.46
SLC44A4-202ENST00000229729 ITGAEP38570 1179 aa17.91■□□□□ 0.46
SLC44A4-202ENST00000229729 ARAP1Q96P48 1450 aa17.9■□□□□ 0.46
SLC44A4-202ENST00000229729 MAPKBP1O60336 1514 aa17.89■□□□□ 0.45
SLC44A4-202ENST00000229729 DDX10Q13206 875 aaKnown RBP17.89■□□□□ 0.45
SLC44A4-202ENST00000229729 CCNB3Q8WWL7 1395 aa17.89■□□□□ 0.45
SLC44A4-202ENST00000229729 KANK4Q5T7N3 995 aaPredicted RBP17.88■□□□□ 0.45
SLC44A4-202ENST00000229729 ERICH3Q5RHP9 1530 aa17.87■□□□□ 0.45
SLC44A4-202ENST00000229729 RANGAP1P46060 587 aaPredicted RBP17.86■□□□□ 0.45
SLC44A4-202ENST00000229729 PPP1R15AO75807 674 aaPredicted RBP17.86■□□□□ 0.45
SLC44A4-202ENST00000229729 TOP2BQ02880 1626 aa17.86■□□□□ 0.45
SLC44A4-202ENST00000229729 PRKCSHP14314 528 aaPredicted RBP17.85■□□□□ 0.45
SLC44A4-202ENST00000229729 CDK11AQ9UQ88 783 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms