Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLTAP09496 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.78■□□□□ 0.12
CLTAP09496 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLTAP09496 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLTAP09496 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLTAP09496 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLTAP09496 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CLTAP09496 AL161932.2-201ENST00000435436 679 ntBASIC15.78■□□□□ 0.12
CLTAP09496 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.78■□□□□ 0.12
CLTAP09496 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.78■□□□□ 0.12
CLTAP09496 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
CLTAP09496 PGAM1P5-201ENST00000548011 764 ntBASIC15.78■□□□□ 0.12
CLTAP09496 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLTAP09496 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.78■□□□□ 0.12
CLTAP09496 AL157813.1-201ENST00000612996 587 ntBASIC15.78■□□□□ 0.12
CLTAP09496 AC091544.8-201ENST00000619490 361 ntBASIC15.78■□□□□ 0.12
CLTAP09496 AC092299.1-201ENST00000632679 757 ntBASIC15.78■□□□□ 0.12
CLTAP09496 NAP1L6-202ENST00000641404 1222 ntBASIC15.78■□□□□ 0.12
CLTAP09496 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLTAP09496 AL157791.1-201ENST00000553667 1699 ntBASIC15.78■□□□□ 0.12
CLTAP09496 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLTAP09496 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLTAP09496 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLTAP09496 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLTAP09496 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLTAP09496 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLTAP09496 CICP17-201ENST00000418553 2377 ntBASIC15.78■□□□□ 0.12
CLTAP09496 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLTAP09496 BEND3P1-201ENST00000421591 1944 ntBASIC15.78■□□□□ 0.12
CLTAP09496 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.78■□□□□ 0.12
CLTAP09496 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.78■□□□□ 0.12
CLTAP09496 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLTAP09496 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLTAP09496 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.78■□□□□ 0.12
CLTAP09496 AC090505.1-201ENST00000430515 1834 ntBASIC15.78■□□□□ 0.12
CLTAP09496 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.78■□□□□ 0.12
CLTAP09496 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLTAP09496 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
CLTAP09496 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CLTAP09496 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CLTAP09496 RN7SL832P-201ENST00000607781 1756 ntBASIC15.77■□□□□ 0.12
CLTAP09496 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLTAP09496 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLTAP09496 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLTAP09496 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLTAP09496 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLTAP09496 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLTAP09496 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLTAP09496 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CLTAP09496 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.77■□□□□ 0.12
CLTAP09496 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLTAP09496 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CLTAP09496 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLTAP09496 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLTAP09496 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.77■□□□□ 0.12
CLTAP09496 BCYRN1-201ENST00000418539 200 ntBASIC15.77■□□□□ 0.12
CLTAP09496 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLTAP09496 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.77■□□□□ 0.12
CLTAP09496 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.77■□□□□ 0.12
CLTAP09496 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.77■□□□□ 0.12
CLTAP09496 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLTAP09496 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.77■□□□□ 0.12
CLTAP09496 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.77■□□□□ 0.12
CLTAP09496 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLTAP09496 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLTAP09496 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLTAP09496 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLTAP09496 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLTAP09496 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.77■□□□□ 0.11
CLTAP09496 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CLTAP09496 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLTAP09496 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CLTAP09496 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLTAP09496 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.77■□□□□ 0.11
CLTAP09496 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
CLTAP09496 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLTAP09496 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLTAP09496 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLTAP09496 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLTAP09496 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.77■□□□□ 0.11
CLTAP09496 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLTAP09496 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 CICP8-201ENST00000455800 2813 ntBASIC15.76■□□□□ 0.11
CLTAP09496 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.76■□□□□ 0.11
CLTAP09496 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLTAP09496 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.76■□□□□ 0.11
CLTAP09496 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.76■□□□□ 0.11
CLTAP09496 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.76■□□□□ 0.11
CLTAP09496 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLTAP09496 AC064801.2-201ENST00000625052 1303 ntBASIC15.76■□□□□ 0.11
CLTAP09496 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CLTAP09496 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.76■□□□□ 0.11
CLTAP09496 OR2R1P-201ENST00000441404 914 ntBASIC15.76■□□□□ 0.11
CLTAP09496 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.76■□□□□ 0.11
CLTAP09496 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms