Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 ACTG1P17-201ENST00000558391 1119 ntBASIC16.18■□□□□ 0.18
TNFRSF25Q93038 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 PHBP15-201ENST00000574228 665 ntBASIC16.18■□□□□ 0.18
TNFRSF25Q93038 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 MIR6787-201ENST00000616675 61 ntBASIC16.18■□□□□ 0.18
TNFRSF25Q93038 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
TNFRSF25Q93038 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 PDIA3P2-201ENST00000428073 158 ntBASIC16.17■□□□□ 0.18
TNFRSF25Q93038 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 AF254983.2-201ENST00000612331 135 ntBASIC16.17■□□□□ 0.18
TNFRSF25Q93038 CR392039.2-201ENST00000623182 509 ntBASIC16.17■□□□□ 0.18
TNFRSF25Q93038 AC079336.7-201ENST00000623428 1078 ntBASIC16.17■□□□□ 0.18
TNFRSF25Q93038 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 AC008620.2-201ENST00000510294 1569 ntBASIC16.17■□□□□ 0.18
TNFRSF25Q93038 AL139158.3-201ENST00000641212 1562 ntBASIC16.17■□□□□ 0.18
TNFRSF25Q93038 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TNFRSF25Q93038 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TNFRSF25Q93038 FMO6P-201ENST00000236166 1620 ntBASIC16.16■□□□□ 0.18
TNFRSF25Q93038 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms