Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 AC138649.2-201ENST00000615886 705 ntBASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 AL591471.1-201ENST00000621855 229 ntBASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 AC026740.1-201ENST00000607068 791 ntBASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 AC244452.3-201ENST00000636814 210 ntBASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.16■□□□□ 0.02
SCUBE3Q8IX30 AP002353.1-201ENST00000528257 1599 ntBASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 RN7SKP214-201ENST00000364208 315 ntBASIC15.15■□□□□ 0.02
SCUBE3Q8IX30 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms