Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 AL359881.2-201ENST00000602973 570 ntBASIC12.7□□□□□ -0.38
C11orf88Q6PI97 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 PCDHB18P-202ENST00000526308 3197 ntBASIC12.7□□□□□ -0.38
C11orf88Q6PI97 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 AC004241.5-201ENST00000623870 2448 ntBASIC12.69□□□□□ -0.38
C11orf88Q6PI97 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 TCAM1P-207ENST00000485295 1537 ntBASIC12.69□□□□□ -0.38
C11orf88Q6PI97 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 AC023794.5-201ENST00000564380 2157 ntBASIC12.69□□□□□ -0.38
C11orf88Q6PI97 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 HIST3H2BA-201ENST00000436555 524 ntBASIC12.69□□□□□ -0.38
C11orf88Q6PI97 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 TNRC18P1-201ENST00000502875 3650 ntBASIC12.69□□□□□ -0.38
C11orf88Q6PI97 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
C11orf88Q6PI97 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms