RNA–Protein interactions for RNA: ENST00000369236.5

GFRA1-203, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GFRA1, Length 9,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-203ENST00000369236 PELP1Q8IZL8 1130 aaKnown RBP20.17■□□□□ 0.82
GFRA1-203ENST00000369236 MYT1Q01538 1121 aa19.78■□□□□ 0.76
GFRA1-203ENST00000369236 CCER1Q8TC90 406 aaPredicted RBP19.13■□□□□ 0.65
GFRA1-203ENST00000369236 ERICH6Q7L0X2 663 aa19.1■□□□□ 0.65
GFRA1-203ENST00000369236 CENPBP07199 599 aaPredicted RBP18.85■□□□□ 0.61
GFRA1-203ENST00000369236 DCAF8L2P0C7V8 631 aa18.71■□□□□ 0.59
GFRA1-203ENST00000369236 YTHDC1Q96MU7 727 aaKnown RBP18.61■□□□□ 0.57
GFRA1-203ENST00000369236 TTBK1Q5TCY1 1321 aaPredicted RBP18.53■□□□□ 0.56
GFRA1-203ENST00000369236 ZEB1P37275 1124 aaPredicted RBP18.48■□□□□ 0.55
GFRA1-203ENST00000369236 NEFLP07196 543 aa18.35■□□□□ 0.53
GFRA1-203ENST00000369236 SUPT5HO00267 1087 aaKnown RBP18.33■□□□□ 0.53
GFRA1-203ENST00000369236 APLP2Q06481 763 aa18.31■□□□□ 0.52
GFRA1-203ENST00000369236 DAXXQ9UER7 740 aaPredicted RBP18.08■□□□□ 0.48
GFRA1-203ENST00000369236 PCGF6Q9BYE7 350 aa18.07■□□□□ 0.48
GFRA1-203ENST00000369236 FAM9AQ8IZU1 332 aaPredicted RBP17.87■□□□□ 0.45
GFRA1-203ENST00000369236 RTL5Q5HYW3 569 aaPredicted RBP17.82■□□□□ 0.44
GFRA1-203ENST00000369236 EHMT2Q96KQ7 1210 aa17.81■□□□□ 0.44
GFRA1-203ENST00000369236 SHROOM4Q9ULL8 1493 aa17.65■□□□□ 0.42
GFRA1-203ENST00000369236 ZNF316A6NFI3 1004 aaPredicted RBP17.61■□□□□ 0.41
GFRA1-203ENST00000369236 GLIPR1L2Q4G1C9 344 aa17.48■□□□□ 0.39
GFRA1-203ENST00000369236 NISCHQ9Y2I1 1504 aa17.41■□□□□ 0.38
GFRA1-203ENST00000369236 HRCP23327 699 aa17.35■□□□□ 0.37
GFRA1-203ENST00000369236 TRIM26Q12899 539 aaPredicted RBP17.3■□□□□ 0.36
GFRA1-203ENST00000369236 MYT1LQ9UL68 1186 aa17.18■□□□□ 0.34
GFRA1-203ENST00000369236 CLSPNQ9HAW4 1339 aa17.18■□□□□ 0.34
GFRA1-203ENST00000369236 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
GFRA1-203ENST00000369236 CDK11AQ9UQ88 783 aaPredicted RBP17.08■□□□□ 0.33
GFRA1-203ENST00000369236 EIF5BO60841 1220 aaKnown RBP17.04■□□□□ 0.32
GFRA1-203ENST00000369236 UBTFP17480 764 aaKnown RBP17.03■□□□□ 0.32
GFRA1-203ENST00000369236 DIEXFQ68CQ4 756 aaKnown RBP17.03■□□□□ 0.32
GFRA1-203ENST00000369236 ATP1B4Q9UN42 357 aaPredicted RBP17.01■□□□□ 0.31
GFRA1-203ENST00000369236 ANP32BQ92688 251 aaKnown RBP16.99■□□□□ 0.31
GFRA1-203ENST00000369236 ANP32AP39687 249 aaKnown RBP16.95■□□□□ 0.3
GFRA1-203ENST00000369236 RANGAP1P46060 587 aaPredicted RBP16.94■□□□□ 0.3
GFRA1-203ENST00000369236 GTF3C3Q9Y5Q9 886 aa16.91■□□□□ 0.3
GFRA1-203ENST00000369236 POLR3GLQ9BT43 218 aa16.82■□□□□ 0.28
GFRA1-203ENST00000369236 ZBTB47Q9UFB7 747 aaPredicted RBP16.79■□□□□ 0.28
GFRA1-203ENST00000369236 TNNT2P45379 298 aaPredicted RBP16.69■□□□□ 0.26
GFRA1-203ENST00000369236 BCANQ96GW7 911 aa16.66■□□□□ 0.26
GFRA1-203ENST00000369236 ANP32CO43423 234 aa16.63■□□□□ 0.25
GFRA1-203ENST00000369236 ACIN1Q9UKV3 1341 aaKnown RBP16.63■□□□□ 0.25
GFRA1-203ENST00000369236 PPARGC1BQ86YN6 1023 aaKnown RBP16.59■□□□□ 0.25
GFRA1-203ENST00000369236 UPF2Q9HAU5 1272 aaKnown RBP16.54■□□□□ 0.24
GFRA1-203ENST00000369236 CANXP27824 592 aaKnown RBP16.53■□□□□ 0.24
GFRA1-203ENST00000369236 HSP90AA1P07900 732 aaKnown RBP16.53■□□□□ 0.24
GFRA1-203ENST00000369236 SLC4A1APQ9BWU0 796 aaKnown RBP16.52■□□□□ 0.24
GFRA1-203ENST00000369236 ITGAEP38570 1179 aa16.5■□□□□ 0.23
GFRA1-203ENST00000369236 CNGB1Q14028 1251 aaPredicted RBP16.48■□□□□ 0.23
GFRA1-203ENST00000369236 HNRNPUL2Q1KMD3 747 aaKnown RBP16.47■□□□□ 0.23
GFRA1-203ENST00000369236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
GFRA1-203ENST00000369236 TRIM44Q96DX7 344 aaPredicted RBP16.44■□□□□ 0.22
GFRA1-203ENST00000369236 NPM2Q86SE8 214 aaKnown RBP16.42■□□□□ 0.22
GFRA1-203ENST00000369236 ANP32EQ9BTT0 268 aa16.41■□□□□ 0.22
GFRA1-203ENST00000369236 NEFMP07197 916 aa16.4■□□□□ 0.22
GFRA1-203ENST00000369236 CDK11BP21127 795 aaKnown RBP16.39■□□□□ 0.21
GFRA1-203ENST00000369236 NBR1Q14596 966 aa16.36■□□□□ 0.21
GFRA1-203ENST00000369236 NCLP19338 710 aaKnown RBP16.35■□□□□ 0.21
GFRA1-203ENST00000369236 ERICH6BQ5W0A0 696 aa16.28■□□□□ 0.2
GFRA1-203ENST00000369236 DDRGK1Q96HY6 314 aa16.23■□□□□ 0.19
GFRA1-203ENST00000369236 FKBP8Q14318 412 aa16.22■□□□□ 0.19
GFRA1-203ENST00000369236 BECN1Q14457 450 aa16.17■□□□□ 0.18
GFRA1-203ENST00000369236 NEUROD1Q13562 356 aa16.14■□□□□ 0.17
GFRA1-203ENST00000369236 LOC105371045A0A1W2PR82 267 aa16.14■□□□□ 0.17
GFRA1-203ENST00000369236 GOLGA6L22H0YM25 854 aa16.12■□□□□ 0.17
GFRA1-203ENST00000369236 FAM50AQ14320 339 aaKnown RBP16.12■□□□□ 0.17
GFRA1-203ENST00000369236 ARXQ96QS3 562 aa16.11■□□□□ 0.17
GFRA1-203ENST00000369236 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.11■□□□□ 0.17
GFRA1-203ENST00000369236 NAP1L5Q96NT1 182 aaPredicted RBP16.1■□□□□ 0.17
GFRA1-203ENST00000369236 CCDC136Q96JN2 1154 aa16.1■□□□□ 0.17
GFRA1-203ENST00000369236 TRIM52Q96A61 297 aa16.09■□□□□ 0.17
GFRA1-203ENST00000369236 BCL11AQ9H165 835 aa16.08■□□□□ 0.16
GFRA1-203ENST00000369236 CHIC1Q5VXU3 224 aa16.06■□□□□ 0.16
GFRA1-203ENST00000369236 DNTTIP2Q5QJE6 756 aaKnown RBP16.04■□□□□ 0.16
GFRA1-203ENST00000369236 SLC24A1O60721 1099 aa16.02■□□□□ 0.16
GFRA1-203ENST00000369236 PTMAP06454 111 aaKnown RBP16.01■□□□□ 0.15
GFRA1-203ENST00000369236 PPM1GO15355 546 aaPredicted RBP16■□□□□ 0.15
GFRA1-203ENST00000369236 CHAF1AQ13111 956 aaPredicted RBP15.97■□□□□ 0.15
GFRA1-203ENST00000369236 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
GFRA1-203ENST00000369236 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
GFRA1-203ENST00000369236 ZNF326Q5BKZ1 582 aaKnown RBP15.96■□□□□ 0.15
GFRA1-203ENST00000369236 GOLGA6L6A8MZA4 724 aa15.95■□□□□ 0.14
GFRA1-203ENST00000369236 ZRSR1Q15695 479 aaKnown RBP15.92■□□□□ 0.14
GFRA1-203ENST00000369236 MYH16Q9H6N6 1097 aa15.91■□□□□ 0.14
GFRA1-203ENST00000369236 DCAF1Q9Y4B6 1507 aa15.88■□□□□ 0.13
GFRA1-203ENST00000369236 NRDCO43847 1150 aa15.87■□□□□ 0.13
GFRA1-203ENST00000369236 CCDC180Q9P1Z9 1646 aa15.87■□□□□ 0.13
GFRA1-203ENST00000369236 L1TD1Q5T7N2 865 aaKnown RBP15.85■□□□□ 0.13
GFRA1-203ENST00000369236 TONSLQ96HA7 1378 aa15.83■□□□□ 0.12
GFRA1-203ENST00000369236 MSNP26038 577 aaKnown RBP15.83■□□□□ 0.12
GFRA1-203ENST00000369236 NOP58Q9Y2X3 529 aaKnown RBP15.82■□□□□ 0.12
GFRA1-203ENST00000369236 CASC1Q6TDU7 716 aa15.79■□□□□ 0.12
GFRA1-203ENST00000369236 RTN4Q9NQC3 1192 aaKnown RBP15.79■□□□□ 0.12
GFRA1-203ENST00000369236 TNNT3P45378 269 aaPredicted RBP15.78■□□□□ 0.12
GFRA1-203ENST00000369236 FAM9BQ8IZU0 186 aa15.75■□□□□ 0.11
GFRA1-203ENST00000369236 TMC1Q8TDI8 760 aa15.75■□□□□ 0.11
GFRA1-203ENST00000369236 WDR43Q15061 677 aaKnown RBP eCLIP15.7■□□□□ 0.1
GFRA1-203ENST00000369236 AMER1Q5JTC6 1135 aaPredicted RBP15.7■□□□□ 0.1
GFRA1-203ENST00000369236 DEKP35659 375 aaKnown RBP15.69■□□□□ 0.1
GFRA1-203ENST00000369236 PTMSP20962 102 aa15.69■□□□□ 0.1
GFRA1-203ENST00000369236 CALRP27797 417 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms