Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 AC004945.1-201ENST00000416738 983 ntBASIC13.24□□□□□ -0.29
PUDPQ08623 ARSEP1-201ENST00000420443 635 ntBASIC13.24□□□□□ -0.29
PUDPQ08623 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.24□□□□□ -0.29
PUDPQ08623 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.24□□□□□ -0.29
PUDPQ08623 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.24□□□□□ -0.29
PUDPQ08623 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
PUDPQ08623 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 LINC02084-201ENST00000606069 1096 ntBASIC13.24□□□□□ -0.29
PUDPQ08623 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
PUDPQ08623 AC002472.3-201ENST00000640124 621 ntBASIC13.24□□□□□ -0.29
PUDPQ08623 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 AC090505.1-201ENST00000430515 1834 ntBASIC13.24□□□□□ -0.29
PUDPQ08623 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.24□□□□□ -0.29
PUDPQ08623 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.24□□□□□ -0.29
PUDPQ08623 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.24□□□□□ -0.29
PUDPQ08623 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
PUDPQ08623 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
PUDPQ08623 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 AL590440.2-201ENST00000641973 1595 ntBASIC13.24□□□□□ -0.29
PUDPQ08623 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.23□□□□□ -0.29
PUDPQ08623 NUTM2HP-201ENST00000442076 2498 ntBASIC13.23□□□□□ -0.29
PUDPQ08623 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.23□□□□□ -0.29
PUDPQ08623 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PUDPQ08623 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.23□□□□□ -0.29
PUDPQ08623 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PUDPQ08623 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.23□□□□□ -0.29
PUDPQ08623 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC13.23□□□□□ -0.29
PUDPQ08623 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.23□□□□□ -0.29
PUDPQ08623 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
PUDPQ08623 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.23□□□□□ -0.29
PUDPQ08623 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.23□□□□□ -0.29
PUDPQ08623 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 AC006001.1-201ENST00000325130 474 ntBASIC13.23□□□□□ -0.29
PUDPQ08623 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PUDPQ08623 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.23□□□□□ -0.29
PUDPQ08623 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.23□□□□□ -0.29
PUDPQ08623 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PUDPQ08623 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.23□□□□□ -0.29
PUDPQ08623 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
PUDPQ08623 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 COX5BP1-201ENST00000507622 393 ntBASIC13.23□□□□□ -0.29
PUDPQ08623 AP003171.2-201ENST00000528208 925 ntBASIC13.23□□□□□ -0.29
PUDPQ08623 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.23□□□□□ -0.29
PUDPQ08623 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.23□□□□□ -0.29
PUDPQ08623 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
PUDPQ08623 RN7SL713P-201ENST00000582127 302 ntBASIC13.23□□□□□ -0.29
PUDPQ08623 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.23□□□□□ -0.29
PUDPQ08623 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
PUDPQ08623 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PUDPQ08623 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.23□□□□□ -0.29
PUDPQ08623 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PUDPQ08623 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.23□□□□□ -0.29
PUDPQ08623 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.23□□□□□ -0.29
PUDPQ08623 AC215219.1-201ENST00000400706 1817 ntBASIC13.23□□□□□ -0.29
PUDPQ08623 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PUDPQ08623 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PUDPQ08623 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PUDPQ08623 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
PUDPQ08623 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PUDPQ08623 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PUDPQ08623 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PUDPQ08623 KHSRPP1-201ENST00000427983 1768 ntBASIC13.22□□□□□ -0.29
PUDPQ08623 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PUDPQ08623 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PUDPQ08623 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms