Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ATXN3P54252 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ATXN3P54252 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
ATXN3P54252 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
ATXN3P54252 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.84□□□□□ -0.03
ATXN3P54252 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.84□□□□□ -0.03
ATXN3P54252 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.84□□□□□ -0.03
ATXN3P54252 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.84□□□□□ -0.03
ATXN3P54252 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.84□□□□□ -0.03
ATXN3P54252 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.84□□□□□ -0.03
ATXN3P54252 NOC2LP1-201ENST00000450578 752 ntBASIC14.84□□□□□ -0.03
ATXN3P54252 AC125604.1-201ENST00000496255 707 ntBASIC14.84□□□□□ -0.03
ATXN3P54252 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 MARK2P5-201ENST00000507649 634 ntBASIC14.84□□□□□ -0.03
ATXN3P54252 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.84□□□□□ -0.03
ATXN3P54252 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ATXN3P54252 AC020922.3-201ENST00000595064 547 ntBASIC14.84□□□□□ -0.03
ATXN3P54252 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.84□□□□□ -0.03
ATXN3P54252 AL353770.1-201ENST00000614915 403 ntBASIC14.84□□□□□ -0.03
ATXN3P54252 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.84□□□□□ -0.03
ATXN3P54252 AP003419.4-201ENST00000616071 517 ntBASIC14.84□□□□□ -0.03
ATXN3P54252 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ATXN3P54252 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.84□□□□□ -0.03
ATXN3P54252 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.84□□□□□ -0.03
ATXN3P54252 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
ATXN3P54252 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.84□□□□□ -0.03
ATXN3P54252 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.84□□□□□ -0.03
ATXN3P54252 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 HSPA7-201ENST00000445535 1927 ntBASIC14.84□□□□□ -0.03
ATXN3P54252 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.84□□□□□ -0.03
ATXN3P54252 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.84□□□□□ -0.03
ATXN3P54252 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATXN3P54252 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ATXN3P54252 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATXN3P54252 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATXN3P54252 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATXN3P54252 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATXN3P54252 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.83□□□□□ -0.03
ATXN3P54252 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
ATXN3P54252 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATXN3P54252 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.83□□□□□ -0.03
ATXN3P54252 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATXN3P54252 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATXN3P54252 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ATXN3P54252 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.83□□□□□ -0.03
ATXN3P54252 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.83□□□□□ -0.03
ATXN3P54252 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
ATXN3P54252 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATXN3P54252 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATXN3P54252 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATXN3P54252 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
ATXN3P54252 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATXN3P54252 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATXN3P54252 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATXN3P54252 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATXN3P54252 AP003171.2-201ENST00000528208 925 ntBASIC14.83□□□□□ -0.04
ATXN3P54252 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATXN3P54252 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.83□□□□□ -0.04
ATXN3P54252 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.83□□□□□ -0.04
ATXN3P54252 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.83□□□□□ -0.04
ATXN3P54252 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATXN3P54252 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.83□□□□□ -0.04
ATXN3P54252 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.83□□□□□ -0.04
ATXN3P54252 AC090164.2-201ENST00000611487 516 ntBASIC14.83□□□□□ -0.04
ATXN3P54252 AP000346.4-201ENST00000614827 381 ntBASIC14.83□□□□□ -0.04
ATXN3P54252 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATXN3P54252 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATXN3P54252 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.83□□□□□ -0.04
ATXN3P54252 AL137784.3-201ENST00000623858 2288 ntBASIC14.83□□□□□ -0.04
ATXN3P54252 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATXN3P54252 FKBP4P6-201ENST00000457486 1332 ntBASIC14.83□□□□□ -0.04
ATXN3P54252 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATXN3P54252 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATXN3P54252 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATXN3P54252 CICP17-201ENST00000418553 2377 ntBASIC14.83□□□□□ -0.04
ATXN3P54252 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.83□□□□□ -0.04
ATXN3P54252 WASH3P-207ENST00000560956 1394 ntBASIC14.83□□□□□ -0.04
ATXN3P54252 REXO1L2P-201ENST00000425429 2069 ntBASIC14.83□□□□□ -0.04
ATXN3P54252 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATXN3P54252 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.83□□□□□ -0.04
ATXN3P54252 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.83□□□□□ -0.04
ATXN3P54252 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATXN3P54252 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ATXN3P54252 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms