Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMAD6O43541 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMAD6O43541 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMAD6O43541 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMAD6O43541 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMAD6O43541 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMAD6O43541 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMAD6O43541 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SMAD6O43541 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SMAD6O43541 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SMAD6O43541 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SMAD6O43541 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SMAD6O43541 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SMAD6O43541 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.46□□□□□ -0.09
SMAD6O43541 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.46□□□□□ -0.09
SMAD6O43541 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.46□□□□□ -0.09
SMAD6O43541 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.46□□□□□ -0.09
SMAD6O43541 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.46□□□□□ -0.09
SMAD6O43541 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 AC026748.1-201ENST00000624349 3251 ntBASIC14.46□□□□□ -0.09
SMAD6O43541 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
SMAD6O43541 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.46□□□□□ -0.09
SMAD6O43541 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.46□□□□□ -0.09
SMAD6O43541 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.46□□□□□ -0.09
SMAD6O43541 AC016397.2-201ENST00000624848 1985 ntBASIC14.46□□□□□ -0.09
SMAD6O43541 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.46□□□□□ -0.09
SMAD6O43541 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SMAD6O43541 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.46□□□□□ -0.09
SMAD6O43541 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SMAD6O43541 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
SMAD6O43541 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.46□□□□□ -0.09
SMAD6O43541 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.46□□□□□ -0.09
SMAD6O43541 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.46□□□□□ -0.09
SMAD6O43541 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.46□□□□□ -0.09
SMAD6O43541 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.46□□□□□ -0.09
SMAD6O43541 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.46□□□□□ -0.09
SMAD6O43541 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 AC009560.1-201ENST00000620208 434 ntBASIC14.46□□□□□ -0.09
SMAD6O43541 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.46□□□□□ -0.09
SMAD6O43541 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SMAD6O43541 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.46□□□□□ -0.09
SMAD6O43541 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.46□□□□□ -0.09
SMAD6O43541 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMAD6O43541 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SMAD6O43541 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
SMAD6O43541 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMAD6O43541 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
SMAD6O43541 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.46□□□□□ -0.1
SMAD6O43541 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMAD6O43541 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.46□□□□□ -0.1
SMAD6O43541 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.46□□□□□ -0.1
SMAD6O43541 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMAD6O43541 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.46□□□□□ -0.1
SMAD6O43541 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.45□□□□□ -0.1
SMAD6O43541 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.45□□□□□ -0.1
SMAD6O43541 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SMAD6O43541 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.45□□□□□ -0.1
SMAD6O43541 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SMAD6O43541 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SMAD6O43541 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SMAD6O43541 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 AC005089.1-201ENST00000619486 2241 ntBASIC14.45□□□□□ -0.1
SMAD6O43541 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
SMAD6O43541 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 USP17L6P-201ENST00000382470 1197 ntBASIC14.45□□□□□ -0.1
SMAD6O43541 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.45□□□□□ -0.1
SMAD6O43541 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 NDUFS6P1-201ENST00000485187 316 ntBASIC14.45□□□□□ -0.1
SMAD6O43541 AC019193.1-201ENST00000506678 823 ntBASIC14.45□□□□□ -0.1
SMAD6O43541 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.45□□□□□ -0.1
SMAD6O43541 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMAD6O43541 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.45□□□□□ -0.1
SMAD6O43541 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.45□□□□□ -0.1
SMAD6O43541 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.45□□□□□ -0.1
SMAD6O43541 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.45□□□□□ -0.1
SMAD6O43541 MARK2P16-201ENST00000605714 1723 ntBASIC14.45□□□□□ -0.1
SMAD6O43541 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.45□□□□□ -0.1
SMAD6O43541 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms