Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 AK2P2-201ENST00000439142 405 ntBASIC13.67□□□□□ -0.22
AP4S1Q9Y587 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 GIMAP3P-201ENST00000495150 836 ntBASIC13.67□□□□□ -0.22
AP4S1Q9Y587 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 PCDHB19P-202ENST00000625133 2914 ntBASIC13.67□□□□□ -0.22
AP4S1Q9Y587 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.67□□□□□ -0.22
AP4S1Q9Y587 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 AC115284.2-201ENST00000624646 2054 ntBASIC13.67□□□□□ -0.22
AP4S1Q9Y587 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 AL138828.2-201ENST00000615812 383 ntBASIC13.66□□□□□ -0.22
AP4S1Q9Y587 SPDYE12P-201ENST00000618416 771 ntBASIC13.66□□□□□ -0.22
AP4S1Q9Y587 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 AC106818.1-201ENST00000623223 3242 ntBASIC13.66□□□□□ -0.22
AP4S1Q9Y587 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 AC092053.3-201ENST00000641308 4975 ntBASIC13.66□□□□□ -0.22
AP4S1Q9Y587 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP4S1Q9Y587 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms