Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFT1Q96AA3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
RFT1Q96AA3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 NUS1P3-201ENST00000423502 862 ntBASIC12.86□□□□□ -0.35
RFT1Q96AA3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.86□□□□□ -0.35
RFT1Q96AA3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 AC026434.2-201ENST00000506094 1078 ntBASIC12.86□□□□□ -0.35
RFT1Q96AA3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
RFT1Q96AA3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFT1Q96AA3 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 HSPA8P5-201ENST00000456928 2069 ntBASIC12.85□□□□□ -0.35
RFT1Q96AA3 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 MYADML-201ENST00000474610 2147 ntBASIC12.85□□□□□ -0.35
RFT1Q96AA3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms