Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHMP7Q8WUX9 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHMP7Q8WUX9 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CHMP7Q8WUX9 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC22.7■■□□□ 1.22
CHMP7Q8WUX9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CHMP7Q8WUX9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CHMP7Q8WUX9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC22.7■■□□□ 1.22
CHMP7Q8WUX9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHMP7Q8WUX9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHMP7Q8WUX9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHMP7Q8WUX9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
CHMP7Q8WUX9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 GUCY2EP-203ENST00000531117 1918 ntBASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 AC079250.1-201ENST00000456046 531 ntBASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 AF186996.6-201ENST00000485294 149 ntBASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 RNA5SP288-201ENST00000516075 93 ntBASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 CD44-224ENST00000526669 870 ntTSL 5 BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 PCTP-206ENST00000573500 919 ntTSL 3 BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 AP006248.1-201ENST00000610471 67 ntBASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHMP7Q8WUX9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 CRIP1P2-201ENST00000425396 228 ntBASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 OR4A49P-201ENST00000527050 632 ntBASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 RN7SL300P-201ENST00000582522 318 ntBASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 SNX20-205ENST00000610485 557 ntTSL 5 BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 GARS-210ENST00000627489 324 ntTSL 4 BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHMP7Q8WUX9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 AC041040.1-201ENST00000425197 460 ntBASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 HLA-W-207ENST00000439514 771 ntBASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 KRT18P15-201ENST00000458108 1291 ntBASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 ABCD1P3-201ENST00000562927 605 ntBASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 NAT9-204ENST00000578822 839 ntTSL 3 BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHMP7Q8WUX9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC22.66■■□□□ 1.22
CHMP7Q8WUX9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHMP7Q8WUX9 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC22.66■■□□□ 1.22
CHMP7Q8WUX9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHMP7Q8WUX9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms