RNA–Protein interactions for RNA: ENST00000396052.3

LYRM1-202, Transcript of LYR motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYRM1, Length 1,659 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-202ENST00000396052 NISCHQ9Y2I1 1504 aa31.05■■■□□ 2.56
LYRM1-202ENST00000396052 ABCC9O60706 1549 aa28.61■■■□□ 2.17
LYRM1-202ENST00000396052 CCDC180Q9P1Z9 1646 aa28.09■■■□□ 2.09
LYRM1-202ENST00000396052 DNAJC5BQ9UF47 199 aa27.35■■□□□ 1.97
LYRM1-202ENST00000396052 RB1CC1Q8TDY2 1594 aa27.01■■□□□ 1.91
LYRM1-202ENST00000396052 NACADO15069 1562 aa26.7■■□□□ 1.86
LYRM1-202ENST00000396052 PABPN1Q86U42 306 aaKnown RBP eCLIP26.56■■□□□ 1.84
LYRM1-202ENST00000396052 DCAF8L2P0C7V8 631 aa26.42■■□□□ 1.82
LYRM1-202ENST00000396052 UNC13AQ9UPW8 1703 aa26.36■■□□□ 1.81
LYRM1-202ENST00000396052 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
LYRM1-202ENST00000396052 MYO15BQ96JP2 1530 aa26.18■■□□□ 1.78
LYRM1-202ENST00000396052 SHROOM4Q9ULL8 1493 aa25.86■■□□□ 1.73
LYRM1-202ENST00000396052 CECR2Q9BXF3 1484 aa25.85■■□□□ 1.73
LYRM1-202ENST00000396052 CC2D2AQ9P2K1 1620 aa25.82■■□□□ 1.72
LYRM1-202ENST00000396052 EIF4G1Q04637 1599 aaKnown RBP25.65■■□□□ 1.7
LYRM1-202ENST00000396052 DCAF1Q9Y4B6 1507 aa25.63■■□□□ 1.69
LYRM1-202ENST00000396052 ZCCHC6Q5VYS8 1495 aaKnown RBP25.61■■□□□ 1.69
LYRM1-202ENST00000396052 DNAJC5Q9H3Z4 198 aa25.54■■□□□ 1.68
LYRM1-202ENST00000396052 SCRIBQ14160 1630 aa25.53■■□□□ 1.68
LYRM1-202ENST00000396052 CUX2O14529 1486 aa24.92■■□□□ 1.58
LYRM1-202ENST00000396052 ERCC6Q03468 1493 aa24.74■■□□□ 1.55
LYRM1-202ENST00000396052 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
LYRM1-202ENST00000396052 ATAD2BQ9ULI0 1458 aa24.5■■□□□ 1.51
LYRM1-202ENST00000396052 NESP48681 1621 aa24.42■■□□□ 1.5
LYRM1-202ENST00000396052 HMGXB3Q12766 1538 aa24.42■■□□□ 1.5
LYRM1-202ENST00000396052 SMARCA2P51531 1590 aa24.4■■□□□ 1.5
LYRM1-202ENST00000396052 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
LYRM1-202ENST00000396052 THOC2Q8NI27 1593 aaKnown RBP24.29■■□□□ 1.48
LYRM1-202ENST00000396052 BAZ1BQ9UIG0 1483 aaKnown RBP24.22■■□□□ 1.47
LYRM1-202ENST00000396052 LAMC3Q9Y6N6 1575 aa24.19■■□□□ 1.46
LYRM1-202ENST00000396052 TRIM41Q8WV44 630 aa24.15■■□□□ 1.46
LYRM1-202ENST00000396052 BAZ1AQ9NRL2 1556 aaPredicted RBP24.14■■□□□ 1.45
LYRM1-202ENST00000396052 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
LYRM1-202ENST00000396052 KIF21AQ7Z4S6 1674 aa24.07■■□□□ 1.44
LYRM1-202ENST00000396052 PDS5BQ9NTI5 1447 aa24.07■■□□□ 1.44
LYRM1-202ENST00000396052 MROH2BQ7Z745 1585 aa23.9■■□□□ 1.42
LYRM1-202ENST00000396052 CADPSQ9ULU8 1353 aa23.89■■□□□ 1.41
LYRM1-202ENST00000396052 MRC2Q9UBG0 1479 aa23.88■■□□□ 1.41
LYRM1-202ENST00000396052 WDR62O43379 1518 aa23.85■■□□□ 1.41
LYRM1-202ENST00000396052 OSCARQ8IYS5 282 aa23.69■■□□□ 1.38
LYRM1-202ENST00000396052 CEP164Q9UPV0 1460 aa23.67■■□□□ 1.38
LYRM1-202ENST00000396052 FANCD2Q9BXW9 1451 aa23.6■■□□□ 1.37
LYRM1-202ENST00000396052 WIZO95785 1651 aa23.58■■□□□ 1.36
LYRM1-202ENST00000396052 CFTRP13569 1480 aa23.5■■□□□ 1.35
LYRM1-202ENST00000396052 URB2Q14146 1524 aaKnown RBP23.44■■□□□ 1.34
LYRM1-202ENST00000396052 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
LYRM1-202ENST00000396052 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
LYRM1-202ENST00000396052 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
LYRM1-202ENST00000396052 ARHGEF11O15085 1522 aa23.29■■□□□ 1.32
LYRM1-202ENST00000396052 TOP2AP11388 1531 aaKnown RBP23.25■■□□□ 1.31
LYRM1-202ENST00000396052 IFT140Q96RY7 1462 aa23.24■■□□□ 1.31
LYRM1-202ENST00000396052 ZNF608Q9ULD9 1512 aaPredicted RBP23.24■■□□□ 1.31
LYRM1-202ENST00000396052 RSF1Q96T23 1441 aaPredicted RBP23.22■■□□□ 1.31
LYRM1-202ENST00000396052 PRDM2Q13029 1718 aa23.17■■□□□ 1.3
LYRM1-202ENST00000396052 CYB5RLQ6IPT4 315 aa23.16■■□□□ 1.3
LYRM1-202ENST00000396052 TOPBP1Q92547 1522 aa23.09■■□□□ 1.29
LYRM1-202ENST00000396052 TRHP20396 242 aaPredicted RBP23.07■■□□□ 1.28
LYRM1-202ENST00000396052 EIF4G3O43432 1585 aaKnown RBP23.07■■□□□ 1.28
LYRM1-202ENST00000396052 ABCC8Q09428 1581 aa23.03■■□□□ 1.28
LYRM1-202ENST00000396052 ARAP1Q96P48 1450 aa23.02■■□□□ 1.28
LYRM1-202ENST00000396052 CCDC88BA6NC98 1476 aa23■■□□□ 1.27
LYRM1-202ENST00000396052 CHD1O14646 1710 aa22.99■■□□□ 1.27
LYRM1-202ENST00000396052 AQRO60306 1485 aaKnown RBP eCLIP22.96■■□□□ 1.27
LYRM1-202ENST00000396052 DNMBPQ6XZF7 1577 aa22.95■■□□□ 1.27
LYRM1-202ENST00000396052 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
LYRM1-202ENST00000396052 FBLN2P98095 1184 aa22.9■■□□□ 1.26
LYRM1-202ENST00000396052 POLA1P09884 1462 aaPredicted RBP22.83■■□□□ 1.24
LYRM1-202ENST00000396052 AEBP2Q6ZN18 517 aaPredicted RBP22.81■■□□□ 1.24
LYRM1-202ENST00000396052 CLASP1Q7Z460 1538 aa22.75■■□□□ 1.23
LYRM1-202ENST00000396052 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
LYRM1-202ENST00000396052 TDRD9Q8NDG6 1382 aaKnown RBP22.73■■□□□ 1.23
LYRM1-202ENST00000396052 SOGA1O94964 1423 aa22.72■■□□□ 1.23
LYRM1-202ENST00000396052 SNAPC4Q5SXM2 1469 aa22.71■■□□□ 1.23
LYRM1-202ENST00000396052 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
LYRM1-202ENST00000396052 SYNJ1O43426 1573 aa22.68■■□□□ 1.22
LYRM1-202ENST00000396052 CHMP7Q8WUX9 453 aaPredicted RBP22.68■■□□□ 1.22
LYRM1-202ENST00000396052 MAGI1Q96QZ7 1491 aaPredicted RBP22.63■■□□□ 1.21
LYRM1-202ENST00000396052 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
LYRM1-202ENST00000396052 GRIN2BQ13224 1484 aa22.58■■□□□ 1.21
LYRM1-202ENST00000396052 SYNJ2O15056 1496 aa22.58■■□□□ 1.2
LYRM1-202ENST00000396052 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
LYRM1-202ENST00000396052 CUX1P39880 1505 aa22.48■■□□□ 1.19
LYRM1-202ENST00000396052 PBRM1Q86U86 1689 aa22.42■■□□□ 1.18
LYRM1-202ENST00000396052 ERCC6L2Q5T890 1561 aa22.34■■□□□ 1.17
LYRM1-202ENST00000396052 ABCA5Q8WWZ7 1642 aa22.33■■□□□ 1.16
LYRM1-202ENST00000396052 ABCA10Q8WWZ4 1543 aa22.32■■□□□ 1.16
LYRM1-202ENST00000396052 GRIN2AQ12879 1464 aa22.29■■□□□ 1.16
LYRM1-202ENST00000396052 CEP170Q5SW79 1584 aa22.26■■□□□ 1.15
LYRM1-202ENST00000396052 NUP160Q12769 1436 aa22.24■■□□□ 1.15
LYRM1-202ENST00000396052 SHROOM2Q13796 1616 aa22.2■■□□□ 1.14
LYRM1-202ENST00000396052 ADAMTS12P58397 1594 aa22.19■■□□□ 1.14
LYRM1-202ENST00000396052 KIF13AQ9H1H9 1805 aa22.18■■□□□ 1.14
LYRM1-202ENST00000396052 FHAD1B1AJZ9 1412 aa22.13■■□□□ 1.13
LYRM1-202ENST00000396052 WRNQ14191 1432 aaPredicted RBP eCLIP22.12■■□□□ 1.13
LYRM1-202ENST00000396052 PRG4Q92954 1404 aaPredicted RBP22.06■■□□□ 1.12
LYRM1-202ENST00000396052 ABCC10Q5T3U5 1492 aa22.04■■□□□ 1.12
LYRM1-202ENST00000396052 FAM69CQ0P6D2 419 aa22.04■■□□□ 1.12
LYRM1-202ENST00000396052 ERICH3Q5RHP9 1530 aa22.03■■□□□ 1.12
LYRM1-202ENST00000396052 JPH4Q96JJ6 628 aa22.02■■□□□ 1.12
LYRM1-202ENST00000396052 BIVM-ERCC5R4GMW8 1640 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms