RNA–Protein interactions for RNA: ENST00000562927.2

ABCD1P3-201, Transcript of ATP binding cassette subfamily D member 1 pseudogene 3, humanhuman

BASIC

Gene ABCD1P3, Length 605 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P3-201ENST00000562927 NISCHQ9Y2I1 1504 aa31.55■■■□□ 2.64
ABCD1P3-201ENST00000562927 CCDC180Q9P1Z9 1646 aa28.22■■■□□ 2.11
ABCD1P3-201ENST00000562927 ABCC9O60706 1549 aa28.22■■■□□ 2.11
ABCD1P3-201ENST00000562927 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
ABCD1P3-201ENST00000562927 NACADO15069 1562 aa26.72■■□□□ 1.87
ABCD1P3-201ENST00000562927 DCAF8L2P0C7V8 631 aa26.63■■□□□ 1.85
ABCD1P3-201ENST00000562927 DNAJC5BQ9UF47 199 aa26.48■■□□□ 1.83
ABCD1P3-201ENST00000562927 MYO15BQ96JP2 1530 aa26.41■■□□□ 1.82
ABCD1P3-201ENST00000562927 PABPN1Q86U42 306 aaKnown RBP eCLIP26.32■■□□□ 1.8
ABCD1P3-201ENST00000562927 UNC13AQ9UPW8 1703 aa26.15■■□□□ 1.78
ABCD1P3-201ENST00000562927 ZCCHC6Q5VYS8 1495 aaKnown RBP26.15■■□□□ 1.78
ABCD1P3-201ENST00000562927 BICRAQ9NZM4 1560 aa26.09■■□□□ 1.77
ABCD1P3-201ENST00000562927 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
ABCD1P3-201ENST00000562927 SHROOM4Q9ULL8 1493 aa25.79■■□□□ 1.72
ABCD1P3-201ENST00000562927 SCRIBQ14160 1630 aa25.71■■□□□ 1.71
ABCD1P3-201ENST00000562927 CC2D2AQ9P2K1 1620 aa25.46■■□□□ 1.67
ABCD1P3-201ENST00000562927 EIF4G1Q04637 1599 aaKnown RBP25.44■■□□□ 1.66
ABCD1P3-201ENST00000562927 CECR2Q9BXF3 1484 aa25.42■■□□□ 1.66
ABCD1P3-201ENST00000562927 NCAPD3P42695 1498 aa24.72■■□□□ 1.55
ABCD1P3-201ENST00000562927 ATAD2BQ9ULI0 1458 aa24.62■■□□□ 1.53
ABCD1P3-201ENST00000562927 SMARCA4P51532 1647 aa24.56■■□□□ 1.52
ABCD1P3-201ENST00000562927 SMARCA2P51531 1590 aa24.53■■□□□ 1.52
ABCD1P3-201ENST00000562927 HMGXB3Q12766 1538 aa24.48■■□□□ 1.51
ABCD1P3-201ENST00000562927 BAZ1AQ9NRL2 1556 aaPredicted RBP24.48■■□□□ 1.51
ABCD1P3-201ENST00000562927 BAZ1BQ9UIG0 1483 aaKnown RBP24.36■■□□□ 1.49
ABCD1P3-201ENST00000562927 PEG3Q9GZU2 1588 aa24.36■■□□□ 1.49
ABCD1P3-201ENST00000562927 ERCC6Q03468 1493 aa24.35■■□□□ 1.49
ABCD1P3-201ENST00000562927 MROH2BQ7Z745 1585 aa24.31■■□□□ 1.48
ABCD1P3-201ENST00000562927 CUX2O14529 1486 aa24.31■■□□□ 1.48
ABCD1P3-201ENST00000562927 DNAJC5Q9H3Z4 198 aa24.29■■□□□ 1.48
ABCD1P3-201ENST00000562927 NESP48681 1621 aa24.25■■□□□ 1.47
ABCD1P3-201ENST00000562927 LAMC3Q9Y6N6 1575 aa24.08■■□□□ 1.45
ABCD1P3-201ENST00000562927 PDS5BQ9NTI5 1447 aa23.99■■□□□ 1.43
ABCD1P3-201ENST00000562927 WIZO95785 1651 aa23.97■■□□□ 1.43
ABCD1P3-201ENST00000562927 CADPSQ9ULU8 1353 aa23.96■■□□□ 1.43
ABCD1P3-201ENST00000562927 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.43
ABCD1P3-201ENST00000562927 RSF1Q96T23 1441 aaPredicted RBP23.86■■□□□ 1.41
ABCD1P3-201ENST00000562927 KIF21AQ7Z4S6 1674 aa23.86■■□□□ 1.41
ABCD1P3-201ENST00000562927 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
ABCD1P3-201ENST00000562927 TOP2AP11388 1531 aaKnown RBP23.7■■□□□ 1.38
ABCD1P3-201ENST00000562927 CFTRP13569 1480 aa23.69■■□□□ 1.38
ABCD1P3-201ENST00000562927 WDR62O43379 1518 aa23.69■■□□□ 1.38
ABCD1P3-201ENST00000562927 FANCD2Q9BXW9 1451 aa23.66■■□□□ 1.38
ABCD1P3-201ENST00000562927 CEP164Q9UPV0 1460 aa23.66■■□□□ 1.38
ABCD1P3-201ENST00000562927 CCDC88BA6NC98 1476 aa23.47■■□□□ 1.35
ABCD1P3-201ENST00000562927 URB2Q14146 1524 aaKnown RBP23.45■■□□□ 1.34
ABCD1P3-201ENST00000562927 PRDM2Q13029 1718 aa23.29■■□□□ 1.32
ABCD1P3-201ENST00000562927 OSCARQ8IYS5 282 aa23.25■■□□□ 1.31
ABCD1P3-201ENST00000562927 IFT140Q96RY7 1462 aa23.21■■□□□ 1.31
ABCD1P3-201ENST00000562927 TOPBP1Q92547 1522 aa23.21■■□□□ 1.31
ABCD1P3-201ENST00000562927 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
ABCD1P3-201ENST00000562927 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
ABCD1P3-201ENST00000562927 ZNF608Q9ULD9 1512 aaPredicted RBP23.16■■□□□ 1.3
ABCD1P3-201ENST00000562927 DNMBPQ6XZF7 1577 aa23.1■■□□□ 1.29
ABCD1P3-201ENST00000562927 TARBP1Q13395 1621 aaKnown RBP22.99■■□□□ 1.27
ABCD1P3-201ENST00000562927 POLA1P09884 1462 aaPredicted RBP22.98■■□□□ 1.27
ABCD1P3-201ENST00000562927 EIF4G3O43432 1585 aaKnown RBP22.98■■□□□ 1.27
ABCD1P3-201ENST00000562927 AQRO60306 1485 aaKnown RBP eCLIP22.97■■□□□ 1.27
ABCD1P3-201ENST00000562927 SOGA1O94964 1423 aa22.91■■□□□ 1.26
ABCD1P3-201ENST00000562927 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
ABCD1P3-201ENST00000562927 TDRD9Q8NDG6 1382 aaKnown RBP22.86■■□□□ 1.25
ABCD1P3-201ENST00000562927 RIMBP3CA6NJZ7 1639 aa22.85■■□□□ 1.25
ABCD1P3-201ENST00000562927 RIMBP3BA6NNM3 1639 aa22.85■■□□□ 1.25
ABCD1P3-201ENST00000562927 RIMBP3Q9UFD9 1639 aa22.85■■□□□ 1.25
ABCD1P3-201ENST00000562927 FGD5Q6ZNL6 1462 aa22.84■■□□□ 1.25
ABCD1P3-201ENST00000562927 SUPT5HO00267 1087 aaKnown RBP22.83■■□□□ 1.25
ABCD1P3-201ENST00000562927 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
ABCD1P3-201ENST00000562927 CUX1P39880 1505 aa22.82■■□□□ 1.24
ABCD1P3-201ENST00000562927 FBLN2P98095 1184 aa22.81■■□□□ 1.24
ABCD1P3-201ENST00000562927 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
ABCD1P3-201ENST00000562927 CHD1O14646 1710 aa22.74■■□□□ 1.23
ABCD1P3-201ENST00000562927 SNAPC4Q5SXM2 1469 aa22.71■■□□□ 1.23
ABCD1P3-201ENST00000562927 CYB5RLQ6IPT4 315 aa22.69■■□□□ 1.22
ABCD1P3-201ENST00000562927 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
ABCD1P3-201ENST00000562927 CHMP7Q8WUX9 453 aaPredicted RBP22.67■■□□□ 1.22
ABCD1P3-201ENST00000562927 MAGI1Q96QZ7 1491 aaPredicted RBP22.66■■□□□ 1.22
ABCD1P3-201ENST00000562927 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
ABCD1P3-201ENST00000562927 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
ABCD1P3-201ENST00000562927 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
ABCD1P3-201ENST00000562927 ABCA10Q8WWZ4 1543 aa22.59■■□□□ 1.21
ABCD1P3-201ENST00000562927 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
ABCD1P3-201ENST00000562927 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
ABCD1P3-201ENST00000562927 WRNQ14191 1432 aaPredicted RBP eCLIP22.54■■□□□ 1.2
ABCD1P3-201ENST00000562927 ABCA5Q8WWZ7 1642 aa22.52■■□□□ 1.2
ABCD1P3-201ENST00000562927 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
ABCD1P3-201ENST00000562927 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
ABCD1P3-201ENST00000562927 BIVM-ERCC5R4GMW8 1640 aa22.44■■□□□ 1.18
ABCD1P3-201ENST00000562927 TRHP20396 242 aaPredicted RBP22.4■■□□□ 1.18
ABCD1P3-201ENST00000562927 GRIN2AQ12879 1464 aa22.38■■□□□ 1.17
ABCD1P3-201ENST00000562927 ADAMTS12P58397 1594 aa22.33■■□□□ 1.17
ABCD1P3-201ENST00000562927 FHAD1B1AJZ9 1412 aa22.33■■□□□ 1.17
ABCD1P3-201ENST00000562927 NUP160Q12769 1436 aa22.31■■□□□ 1.16
ABCD1P3-201ENST00000562927 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
ABCD1P3-201ENST00000562927 CEP170Q5SW79 1584 aa22.27■■□□□ 1.16
ABCD1P3-201ENST00000562927 ERCC6L2Q5T890 1561 aa22.22■■□□□ 1.15
ABCD1P3-201ENST00000562927 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
ABCD1P3-201ENST00000562927 JPH4Q96JJ6 628 aa22.12■■□□□ 1.13
ABCD1P3-201ENST00000562927 PRG4Q92954 1404 aaPredicted RBP22.1■■□□□ 1.13
ABCD1P3-201ENST00000562927 IGF1RP08069 1367 aa22.09■■□□□ 1.13
ABCD1P3-201ENST00000562927 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms