RNA–Protein interactions for RNA: ENST00000582055.1

LIMD2-210, Transcript of LIM domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMD2, Length 509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-210ENST00000582055 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
LIMD2-210ENST00000582055 ABCC9O60706 1549 aa28.31■■■□□ 2.12
LIMD2-210ENST00000582055 CCDC180Q9P1Z9 1646 aa28.29■■■□□ 2.12
LIMD2-210ENST00000582055 RB1CC1Q8TDY2 1594 aa26.95■■□□□ 1.9
LIMD2-210ENST00000582055 NACADO15069 1562 aa26.74■■□□□ 1.87
LIMD2-210ENST00000582055 DNAJC5BQ9UF47 199 aa26.63■■□□□ 1.85
LIMD2-210ENST00000582055 DCAF8L2P0C7V8 631 aa26.62■■□□□ 1.85
LIMD2-210ENST00000582055 UNC13AQ9UPW8 1703 aa26.41■■□□□ 1.82
LIMD2-210ENST00000582055 PABPN1Q86U42 306 aaKnown RBP eCLIP26.35■■□□□ 1.81
LIMD2-210ENST00000582055 MYO15BQ96JP2 1530 aa26.34■■□□□ 1.81
LIMD2-210ENST00000582055 BICRAQ9NZM4 1560 aa26.15■■□□□ 1.78
LIMD2-210ENST00000582055 ZCCHC6Q5VYS8 1495 aaKnown RBP26.01■■□□□ 1.75
LIMD2-210ENST00000582055 DCAF1Q9Y4B6 1507 aa25.97■■□□□ 1.75
LIMD2-210ENST00000582055 SHROOM4Q9ULL8 1493 aa25.78■■□□□ 1.72
LIMD2-210ENST00000582055 SCRIBQ14160 1630 aa25.73■■□□□ 1.71
LIMD2-210ENST00000582055 CC2D2AQ9P2K1 1620 aa25.6■■□□□ 1.69
LIMD2-210ENST00000582055 CECR2Q9BXF3 1484 aa25.52■■□□□ 1.68
LIMD2-210ENST00000582055 EIF4G1Q04637 1599 aaKnown RBP25.51■■□□□ 1.67
LIMD2-210ENST00000582055 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
LIMD2-210ENST00000582055 ATAD2BQ9ULI0 1458 aa24.58■■□□□ 1.52
LIMD2-210ENST00000582055 SMARCA4P51532 1647 aa24.55■■□□□ 1.52
LIMD2-210ENST00000582055 DNAJC5Q9H3Z4 198 aa24.54■■□□□ 1.52
LIMD2-210ENST00000582055 SMARCA2P51531 1590 aa24.52■■□□□ 1.52
LIMD2-210ENST00000582055 HMGXB3Q12766 1538 aa24.47■■□□□ 1.51
LIMD2-210ENST00000582055 ERCC6Q03468 1493 aa24.45■■□□□ 1.51
LIMD2-210ENST00000582055 CUX2O14529 1486 aa24.44■■□□□ 1.5
LIMD2-210ENST00000582055 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
LIMD2-210ENST00000582055 BAZ1BQ9UIG0 1483 aaKnown RBP24.34■■□□□ 1.49
LIMD2-210ENST00000582055 PEG3Q9GZU2 1588 aa24.31■■□□□ 1.48
LIMD2-210ENST00000582055 NESP48681 1621 aa24.3■■□□□ 1.48
LIMD2-210ENST00000582055 MROH2BQ7Z745 1585 aa24.21■■□□□ 1.47
LIMD2-210ENST00000582055 LAMC3Q9Y6N6 1575 aa24.15■■□□□ 1.46
LIMD2-210ENST00000582055 THOC2Q8NI27 1593 aaKnown RBP24.07■■□□□ 1.44
LIMD2-210ENST00000582055 KIF21AQ7Z4S6 1674 aa24.04■■□□□ 1.44
LIMD2-210ENST00000582055 PDS5BQ9NTI5 1447 aa24■■□□□ 1.43
LIMD2-210ENST00000582055 WIZO95785 1651 aa23.96■■□□□ 1.43
LIMD2-210ENST00000582055 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
LIMD2-210ENST00000582055 MRC2Q9UBG0 1479 aa23.78■■□□□ 1.4
LIMD2-210ENST00000582055 WDR62O43379 1518 aa23.72■■□□□ 1.39
LIMD2-210ENST00000582055 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
LIMD2-210ENST00000582055 CEP164Q9UPV0 1460 aa23.67■■□□□ 1.38
LIMD2-210ENST00000582055 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.38
LIMD2-210ENST00000582055 CFTRP13569 1480 aa23.62■■□□□ 1.37
LIMD2-210ENST00000582055 TOP2AP11388 1531 aaKnown RBP23.62■■□□□ 1.37
LIMD2-210ENST00000582055 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
LIMD2-210ENST00000582055 URB2Q14146 1524 aaKnown RBP23.44■■□□□ 1.34
LIMD2-210ENST00000582055 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
LIMD2-210ENST00000582055 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
LIMD2-210ENST00000582055 OSCARQ8IYS5 282 aa23.36■■□□□ 1.33
LIMD2-210ENST00000582055 IFT140Q96RY7 1462 aa23.21■■□□□ 1.31
LIMD2-210ENST00000582055 TOPBP1Q92547 1522 aa23.19■■□□□ 1.3
LIMD2-210ENST00000582055 ABCC8Q09428 1581 aa23.17■■□□□ 1.3
LIMD2-210ENST00000582055 ZNF608Q9ULD9 1512 aaPredicted RBP23.16■■□□□ 1.3
LIMD2-210ENST00000582055 DNMBPQ6XZF7 1577 aa23.1■■□□□ 1.29
LIMD2-210ENST00000582055 EIF4G3O43432 1585 aaKnown RBP23.05■■□□□ 1.28
LIMD2-210ENST00000582055 RIMBP3CA6NJZ7 1639 aa23.04■■□□□ 1.28
LIMD2-210ENST00000582055 RIMBP3BA6NNM3 1639 aa23.04■■□□□ 1.28
LIMD2-210ENST00000582055 RIMBP3Q9UFD9 1639 aa23.04■■□□□ 1.28
LIMD2-210ENST00000582055 TARBP1Q13395 1621 aaKnown RBP23■■□□□ 1.27
LIMD2-210ENST00000582055 AQRO60306 1485 aaKnown RBP eCLIP22.97■■□□□ 1.27
LIMD2-210ENST00000582055 CHD1O14646 1710 aa22.94■■□□□ 1.26
LIMD2-210ENST00000582055 ARHGEF11O15085 1522 aa22.93■■□□□ 1.26
LIMD2-210ENST00000582055 POLA1P09884 1462 aaPredicted RBP22.93■■□□□ 1.26
LIMD2-210ENST00000582055 RAD54L2Q9Y4B4 1467 aa22.86■■□□□ 1.25
LIMD2-210ENST00000582055 SOGA1O94964 1423 aa22.86■■□□□ 1.25
LIMD2-210ENST00000582055 FBLN2P98095 1184 aa22.86■■□□□ 1.25
LIMD2-210ENST00000582055 TDRD9Q8NDG6 1382 aaKnown RBP22.81■■□□□ 1.24
LIMD2-210ENST00000582055 CYB5RLQ6IPT4 315 aa22.8■■□□□ 1.24
LIMD2-210ENST00000582055 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
LIMD2-210ENST00000582055 WDR97A6NE52 1622 aa22.77■■□□□ 1.24
LIMD2-210ENST00000582055 CUX1P39880 1505 aa22.75■■□□□ 1.23
LIMD2-210ENST00000582055 SNAPC4Q5SXM2 1469 aa22.71■■□□□ 1.23
LIMD2-210ENST00000582055 ARAP1Q96P48 1450 aa22.69■■□□□ 1.22
LIMD2-210ENST00000582055 CHMP7Q8WUX9 453 aaPredicted RBP22.68■■□□□ 1.22
LIMD2-210ENST00000582055 MAGI1Q96QZ7 1491 aaPredicted RBP22.66■■□□□ 1.22
LIMD2-210ENST00000582055 GRIN2BQ13224 1484 aa22.66■■□□□ 1.22
LIMD2-210ENST00000582055 SYNJ1O43426 1573 aa22.63■■□□□ 1.21
LIMD2-210ENST00000582055 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
LIMD2-210ENST00000582055 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
LIMD2-210ENST00000582055 PBRM1Q86U86 1689 aa22.61■■□□□ 1.21
LIMD2-210ENST00000582055 TRHP20396 242 aaPredicted RBP22.59■■□□□ 1.21
LIMD2-210ENST00000582055 SYNJ2O15056 1496 aa22.59■■□□□ 1.21
LIMD2-210ENST00000582055 GAPVD1Q14C86 1478 aa22.57■■□□□ 1.2
LIMD2-210ENST00000582055 ABCA10Q8WWZ4 1543 aa22.53■■□□□ 1.2
LIMD2-210ENST00000582055 ABCA5Q8WWZ7 1642 aa22.5■■□□□ 1.19
LIMD2-210ENST00000582055 WRNQ14191 1432 aaPredicted RBP eCLIP22.43■■□□□ 1.18
LIMD2-210ENST00000582055 BIVM-ERCC5R4GMW8 1640 aa22.41■■□□□ 1.18
LIMD2-210ENST00000582055 TOP2BQ02880 1626 aa22.39■■□□□ 1.18
LIMD2-210ENST00000582055 GRIN2AQ12879 1464 aa22.35■■□□□ 1.17
LIMD2-210ENST00000582055 ADAMTS12P58397 1594 aa22.33■■□□□ 1.16
LIMD2-210ENST00000582055 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
LIMD2-210ENST00000582055 FHAD1B1AJZ9 1412 aa22.28■■□□□ 1.16
LIMD2-210ENST00000582055 NUP160Q12769 1436 aa22.27■■□□□ 1.16
LIMD2-210ENST00000582055 ERCC6L2Q5T890 1561 aa22.26■■□□□ 1.15
LIMD2-210ENST00000582055 ERICH3Q5RHP9 1530 aa22.26■■□□□ 1.15
LIMD2-210ENST00000582055 SHROOM2Q13796 1616 aa22.22■■□□□ 1.15
LIMD2-210ENST00000582055 JPH4Q96JJ6 628 aa22.1■■□□□ 1.13
LIMD2-210ENST00000582055 PRG4Q92954 1404 aaPredicted RBP22.09■■□□□ 1.13
LIMD2-210ENST00000582055 KIF13AQ9H1H9 1805 aa22.01■■□□□ 1.11
LIMD2-210ENST00000582055 RUSC2Q8N2Y8 1516 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms