Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VPS52Q8N1B4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VPS52Q8N1B4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VPS52Q8N1B4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VPS52Q8N1B4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS52Q8N1B4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS52Q8N1B4 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS52Q8N1B4 FAM90A2P-201ENST00000511144 1395 ntBASIC15.71■□□□□ 0.11
VPS52Q8N1B4 FAM90A25P-201ENST00000528404 1395 ntBASIC15.71■□□□□ 0.11
VPS52Q8N1B4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
VPS52Q8N1B4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.71■□□□□ 0.11
VPS52Q8N1B4 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VPS52Q8N1B4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
VPS52Q8N1B4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.71■□□□□ 0.1
VPS52Q8N1B4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VPS52Q8N1B4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
VPS52Q8N1B4 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VPS52Q8N1B4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VPS52Q8N1B4 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VPS52Q8N1B4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VPS52Q8N1B4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 CYP4F23P-201ENST00000593402 1579 ntBASIC15.7■□□□□ 0.1
VPS52Q8N1B4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 AC026320.2-201ENST00000434379 478 ntBASIC15.7■□□□□ 0.1
VPS52Q8N1B4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 RN7SL181P-201ENST00000462921 277 ntBASIC15.7■□□□□ 0.1
VPS52Q8N1B4 RN7SL67P-201ENST00000492147 296 ntBASIC15.7■□□□□ 0.1
VPS52Q8N1B4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 AC103810.10-201ENST00000606504 343 ntBASIC15.7■□□□□ 0.1
VPS52Q8N1B4 MIR6769A-201ENST00000617340 73 ntBASIC15.7■□□□□ 0.1
VPS52Q8N1B4 AC133540.1-201ENST00000620845 1019 ntBASIC15.7■□□□□ 0.1
VPS52Q8N1B4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 AC051619.9-201ENST00000623237 597 ntBASIC15.7■□□□□ 0.1
VPS52Q8N1B4 AC011491.1-203ENST00000637688 543 ntBASIC15.7■□□□□ 0.1
VPS52Q8N1B4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
VPS52Q8N1B4 AC117489.1-201ENST00000625169 3217 ntBASIC15.7■□□□□ 0.1
VPS52Q8N1B4 FRMPD2B-201ENST00000431305 1347 ntBASIC15.69■□□□□ 0.1
VPS52Q8N1B4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 AC005840.4-201ENST00000541242 2494 ntBASIC15.69■□□□□ 0.1
VPS52Q8N1B4 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.69■□□□□ 0.1
VPS52Q8N1B4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS52Q8N1B4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms