Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2B3Q16720 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2B3Q16720 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2B3Q16720 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2B3Q16720 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2B3Q16720 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2B3Q16720 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2B3Q16720 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2B3Q16720 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2B3Q16720 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2B3Q16720 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2B3Q16720 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2B3Q16720 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2B3Q16720 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2B3Q16720 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 CCT8L1P-201ENST00000465400 1674 ntBASIC17.62■□□□□ 0.41
ATP2B3Q16720 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2B3Q16720 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2B3Q16720 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 AP000358.1-201ENST00000456260 156 ntBASIC17.62■□□□□ 0.41
ATP2B3Q16720 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2B3Q16720 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 AC019193.1-201ENST00000506678 823 ntBASIC17.62■□□□□ 0.41
ATP2B3Q16720 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 KRT8P1-201ENST00000557533 1207 ntBASIC17.62■□□□□ 0.41
ATP2B3Q16720 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.62■□□□□ 0.41
ATP2B3Q16720 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 AC128714.1-201ENST00000637035 887 ntBASIC17.62■□□□□ 0.41
ATP2B3Q16720 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2B3Q16720 BRD7P5-201ENST00000299197 1822 ntBASIC17.62■□□□□ 0.41
ATP2B3Q16720 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2B3Q16720 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2B3Q16720 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 KRT8P31-201ENST00000504812 1408 ntBASIC17.62■□□□□ 0.41
ATP2B3Q16720 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2B3Q16720 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP2B3Q16720 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 MIR557-201ENST00000385239 98 ntBASIC17.61■□□□□ 0.41
ATP2B3Q16720 AL627231.1-201ENST00000394467 1125 ntBASIC17.61■□□□□ 0.41
ATP2B3Q16720 AC092506.1-202ENST00000401022 528 ntBASIC17.61■□□□□ 0.41
ATP2B3Q16720 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP2B3Q16720 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ATP2B3Q16720 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP2B3Q16720 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP2B3Q16720 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP2B3Q16720 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.61■□□□□ 0.41
ATP2B3Q16720 AL353726.2-201ENST00000623259 884 ntBASIC17.61■□□□□ 0.41
ATP2B3Q16720 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP2B3Q16720 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP2B3Q16720 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ATP2B3Q16720 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ATP2B3Q16720 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP2B3Q16720 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2B3Q16720 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms