Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ERCC3P19447 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.73■□□□□ 0.27
ERCC3P19447 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.73■□□□□ 0.27
ERCC3P19447 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.73■□□□□ 0.27
ERCC3P19447 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC3P19447 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 NDUFS6P1-201ENST00000485187 316 ntBASIC16.73■□□□□ 0.27
ERCC3P19447 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 AC093752.3-201ENST00000567343 901 ntBASIC16.73■□□□□ 0.27
ERCC3P19447 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC3P19447 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.73■□□□□ 0.27
ERCC3P19447 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC3P19447 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
ERCC3P19447 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC3P19447 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ERCC3P19447 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
ERCC3P19447 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ERCC3P19447 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.72■□□□□ 0.27
ERCC3P19447 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.72■□□□□ 0.27
ERCC3P19447 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.72■□□□□ 0.27
ERCC3P19447 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.72■□□□□ 0.27
ERCC3P19447 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.72■□□□□ 0.27
ERCC3P19447 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.72■□□□□ 0.27
ERCC3P19447 AL807761.2-201ENST00000422849 729 ntBASIC16.72■□□□□ 0.27
ERCC3P19447 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.72■□□□□ 0.27
ERCC3P19447 DUTP3-201ENST00000450025 415 ntBASIC16.72■□□□□ 0.27
ERCC3P19447 AC130709.1-201ENST00000484779 1212 ntBASIC16.72■□□□□ 0.27
ERCC3P19447 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.72■□□□□ 0.27
ERCC3P19447 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.72■□□□□ 0.27
ERCC3P19447 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
ERCC3P19447 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.72■□□□□ 0.27
ERCC3P19447 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.72■□□□□ 0.27
ERCC3P19447 DNM1P30-201ENST00000563586 452 ntBASIC16.72■□□□□ 0.27
ERCC3P19447 MIR4522-201ENST00000584932 87 ntBASIC16.72■□□□□ 0.27
ERCC3P19447 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.72■□□□□ 0.27
ERCC3P19447 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 AC005912.2-201ENST00000619492 2400 ntBASIC16.72■□□□□ 0.27
ERCC3P19447 AC232323.1-201ENST00000540724 2099 ntBASIC16.72■□□□□ 0.27
ERCC3P19447 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
ERCC3P19447 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.72■□□□□ 0.27
ERCC3P19447 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.72■□□□□ 0.27
ERCC3P19447 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ERCC3P19447 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.72■□□□□ 0.27
ERCC3P19447 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC3P19447 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.71■□□□□ 0.27
ERCC3P19447 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.71■□□□□ 0.27
ERCC3P19447 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
ERCC3P19447 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
ERCC3P19447 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 AC079112.1-201ENST00000454972 939 ntBASIC16.71■□□□□ 0.27
ERCC3P19447 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.71■□□□□ 0.27
ERCC3P19447 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ERCC3P19447 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
ERCC3P19447 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
ERCC3P19447 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.71■□□□□ 0.27
ERCC3P19447 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.71■□□□□ 0.27
ERCC3P19447 AC007326.1-201ENST00000604539 458 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms