Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 AC012362.1-201ENST00000434906 739 ntBASIC12.53□□□□□ -0.4
MBD3L3A6NE82 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 GRPEL2P1-201ENST00000453145 339 ntBASIC12.53□□□□□ -0.4
MBD3L3A6NE82 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 RN7SL564P-201ENST00000496309 250 ntBASIC12.53□□□□□ -0.4
MBD3L3A6NE82 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 AC068867.1-201ENST00000559855 150 ntBASIC12.53□□□□□ -0.4
MBD3L3A6NE82 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 SNORD3B-1-201ENST00000577988 758 ntBASIC12.53□□□□□ -0.4
MBD3L3A6NE82 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 RN7SL357P-201ENST00000581065 298 ntBASIC12.53□□□□□ -0.4
MBD3L3A6NE82 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 HSPA8P5-201ENST00000456928 2069 ntBASIC12.53□□□□□ -0.4
MBD3L3A6NE82 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.53□□□□□ -0.4
MBD3L3A6NE82 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L3A6NE82 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L3A6NE82 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.52□□□□□ -0.4
MBD3L3A6NE82 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L3A6NE82 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L3A6NE82 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L3A6NE82 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L3A6NE82 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.52□□□□□ -0.4
MBD3L3A6NE82 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L3A6NE82 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
MBD3L3A6NE82 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.52□□□□□ -0.4
MBD3L3A6NE82 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 AC004837.1-201ENST00000446267 564 ntBASIC12.52□□□□□ -0.41
MBD3L3A6NE82 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 KRT8P2-201ENST00000556193 944 ntBASIC12.52□□□□□ -0.41
MBD3L3A6NE82 MIR4265-201ENST00000582152 99 ntBASIC12.52□□□□□ -0.41
MBD3L3A6NE82 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 AL132780.4-201ENST00000624870 1135 ntBASIC12.52□□□□□ -0.41
MBD3L3A6NE82 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 DBET-201ENST00000630918 3363 ntBASIC12.52□□□□□ -0.41
MBD3L3A6NE82 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MBD3L3A6NE82 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms