Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.51□□□□□ -0.09
MDH1P40925 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
MDH1P40925 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
MDH1P40925 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.51□□□□□ -0.09
MDH1P40925 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.51□□□□□ -0.09
MDH1P40925 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 SDHAP3-202ENST00000515467 728 ntBASIC14.51□□□□□ -0.09
MDH1P40925 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
MDH1P40925 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.51□□□□□ -0.09
MDH1P40925 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.51□□□□□ -0.09
MDH1P40925 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
MDH1P40925 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC14.51□□□□□ -0.09
MDH1P40925 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.51□□□□□ -0.09
MDH1P40925 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 OS9-203ENST00000389142 2457 ntTSL 5 BASIC14.51□□□□□ -0.09
MDH1P40925 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.51□□□□□ -0.09
MDH1P40925 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MDH1P40925 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
MDH1P40925 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
MDH1P40925 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC14.5□□□□□ -0.09
MDH1P40925 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
MDH1P40925 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC14.5□□□□□ -0.09
MDH1P40925 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC14.5□□□□□ -0.09
MDH1P40925 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
MDH1P40925 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC14.5□□□□□ -0.09
MDH1P40925 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.5□□□□□ -0.09
MDH1P40925 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.5□□□□□ -0.09
MDH1P40925 GPS2P2-201ENST00000430745 888 ntBASIC14.5□□□□□ -0.09
MDH1P40925 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.5□□□□□ -0.09
MDH1P40925 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.5□□□□□ -0.09
MDH1P40925 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.5□□□□□ -0.09
MDH1P40925 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.5□□□□□ -0.09
MDH1P40925 AC010336.2-201ENST00000564226 506 ntBASIC14.5□□□□□ -0.09
MDH1P40925 AC051619.7-201ENST00000568314 623 ntBASIC14.5□□□□□ -0.09
MDH1P40925 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.5□□□□□ -0.09
MDH1P40925 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.5□□□□□ -0.09
MDH1P40925 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.5□□□□□ -0.09
MDH1P40925 AL158212.4-201ENST00000624062 1286 ntBASIC14.5□□□□□ -0.09
MDH1P40925 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
MDH1P40925 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.5□□□□□ -0.09
MDH1P40925 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
MDH1P40925 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.5□□□□□ -0.09
MDH1P40925 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.5□□□□□ -0.09
MDH1P40925 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
MDH1P40925 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
MDH1P40925 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
MDH1P40925 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
MDH1P40925 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MDH1P40925 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.5□□□□□ -0.09
MDH1P40925 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.5□□□□□ -0.09
MDH1P40925 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
MDH1P40925 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms