Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CHMP24386 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.58□□□□□ -0.24
CHMP24386 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CHMP24386 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CHMP24386 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CHMP24386 FAM90A12P-201ENST00000519497 2375 ntBASIC13.58□□□□□ -0.24
CHMP24386 FAM90A24P-201ENST00000520792 2369 ntBASIC13.58□□□□□ -0.24
CHMP24386 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.58□□□□□ -0.24
CHMP24386 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.58□□□□□ -0.24
CHMP24386 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CHMP24386 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 AC215219.1-201ENST00000400706 1817 ntBASIC13.57□□□□□ -0.24
CHMP24386 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
CHMP24386 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.57□□□□□ -0.24
CHMP24386 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 AL591122.2-201ENST00000624125 1853 ntBASIC13.57□□□□□ -0.24
CHMP24386 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.57□□□□□ -0.24
CHMP24386 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.57□□□□□ -0.24
CHMP24386 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.57□□□□□ -0.24
CHMP24386 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.57□□□□□ -0.24
CHMP24386 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 AC092658.1-201ENST00000505836 891 ntBASIC13.57□□□□□ -0.24
CHMP24386 COX5BP1-201ENST00000507622 393 ntBASIC13.57□□□□□ -0.24
CHMP24386 AC106820.3-201ENST00000561653 397 ntBASIC13.57□□□□□ -0.24
CHMP24386 C2orf69P2-201ENST00000562032 1123 ntBASIC13.57□□□□□ -0.24
CHMP24386 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.57□□□□□ -0.24
CHMP24386 RN7SL713P-201ENST00000582127 302 ntBASIC13.57□□□□□ -0.24
CHMP24386 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.57□□□□□ -0.24
CHMP24386 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.57□□□□□ -0.24
CHMP24386 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
CHMP24386 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CHMP24386 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.57□□□□□ -0.24
CHMP24386 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CHMP24386 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CHMP24386 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CHMP24386 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CHMP24386 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CHMP24386 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.57□□□□□ -0.24
CHMP24386 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CHMP24386 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.56□□□□□ -0.24
CHMP24386 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CHMP24386 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.56□□□□□ -0.24
CHMP24386 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.56□□□□□ -0.24
CHMP24386 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 AC011498.7-201ENST00000624986 2027 ntBASIC13.56□□□□□ -0.24
CHMP24386 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
CHMP24386 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.56□□□□□ -0.24
CHMP24386 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.56□□□□□ -0.24
CHMP24386 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 BRWD1P1-201ENST00000401091 371 ntBASIC13.56□□□□□ -0.24
CHMP24386 TLE1P1-201ENST00000422965 589 ntBASIC13.56□□□□□ -0.24
CHMP24386 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CHMP24386 CNN2P10-201ENST00000443067 918 ntBASIC13.56□□□□□ -0.24
CHMP24386 HOMER2P2-201ENST00000451621 847 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms