Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD4P01730 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD4P01730 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CD4P01730 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.83■□□□□ 0.12
CD4P01730 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD4P01730 AC015688.4-201ENST00000580780 1647 ntBASIC15.83■□□□□ 0.12
CD4P01730 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD4P01730 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD4P01730 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD4P01730 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD4P01730 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.83■□□□□ 0.12
CD4P01730 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD4P01730 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.82■□□□□ 0.12
CD4P01730 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CD4P01730 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CD4P01730 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.82■□□□□ 0.12
CD4P01730 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.82■□□□□ 0.12
CD4P01730 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CD4P01730 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.82■□□□□ 0.12
CD4P01730 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.82■□□□□ 0.12
CD4P01730 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.82■□□□□ 0.12
CD4P01730 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.82■□□□□ 0.12
CD4P01730 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.82■□□□□ 0.12
CD4P01730 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.82■□□□□ 0.12
CD4P01730 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC15.82■□□□□ 0.12
CD4P01730 GNG10P1-201ENST00000452289 199 ntBASIC15.82■□□□□ 0.12
CD4P01730 RN7SL494P-201ENST00000461517 304 ntBASIC15.82■□□□□ 0.12
CD4P01730 AC095040.1-201ENST00000513286 675 ntBASIC15.82■□□□□ 0.12
CD4P01730 RNA5SP406-201ENST00000516106 112 ntBASIC15.82■□□□□ 0.12
CD4P01730 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.82■□□□□ 0.12
CD4P01730 NDUFB10P1-201ENST00000567319 521 ntBASIC15.82■□□□□ 0.12
CD4P01730 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.82■□□□□ 0.12
CD4P01730 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CD4P01730 AL118522.1-201ENST00000611368 560 ntBASIC15.82■□□□□ 0.12
CD4P01730 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.82■□□□□ 0.12
CD4P01730 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 CTBP2P8-201ENST00000422584 1330 ntBASIC15.82■□□□□ 0.12
CD4P01730 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.82■□□□□ 0.12
CD4P01730 CICP14-201ENST00000629111 2732 ntBASIC15.82■□□□□ 0.12
CD4P01730 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.82■□□□□ 0.12
CD4P01730 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.82■□□□□ 0.12
CD4P01730 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.82■□□□□ 0.12
CD4P01730 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC15.82■□□□□ 0.12
CD4P01730 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.82■□□□□ 0.12
CD4P01730 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.82■□□□□ 0.12
CD4P01730 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.82■□□□□ 0.12
CD4P01730 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD4P01730 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.82■□□□□ 0.12
CD4P01730 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CD4P01730 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD4P01730 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD4P01730 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.81■□□□□ 0.12
CD4P01730 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CD4P01730 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD4P01730 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD4P01730 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD4P01730 COX20P1-201ENST00000366529 357 ntBASIC15.81■□□□□ 0.12
CD4P01730 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.81■□□□□ 0.12
CD4P01730 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD4P01730 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CD4P01730 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD4P01730 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD4P01730 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.81■□□□□ 0.12
CD4P01730 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CD4P01730 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD4P01730 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.81■□□□□ 0.12
CD4P01730 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC15.81■□□□□ 0.12
CD4P01730 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD4P01730 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CD4P01730 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CD4P01730 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CD4P01730 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD4P01730 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
CD4P01730 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.81■□□□□ 0.12
CD4P01730 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC15.81■□□□□ 0.12
CD4P01730 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms