RNA–Protein interactions for RNA: ENST00000538488.2

PRB3-202, Transcript of proline rich protein BstNI subfamily 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene PRB3, Length 1,283 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRB3-202ENST00000538488 NISCHQ9Y2I1 1504 aa33.58■■■□□ 2.97
PRB3-202ENST00000538488 ABCC9O60706 1549 aa30.48■■■□□ 2.47
PRB3-202ENST00000538488 CCDC180Q9P1Z9 1646 aa30.25■■■□□ 2.43
PRB3-202ENST00000538488 RB1CC1Q8TDY2 1594 aa28.88■■■□□ 2.21
PRB3-202ENST00000538488 DNAJC5BQ9UF47 199 aa28.63■■■□□ 2.17
PRB3-202ENST00000538488 DCAF8L2P0C7V8 631 aa28.61■■■□□ 2.17
PRB3-202ENST00000538488 NACADO15069 1562 aa28.59■■■□□ 2.17
PRB3-202ENST00000538488 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
PRB3-202ENST00000538488 PABPN1Q86U42 306 aaKnown RBP eCLIP28.34■■■□□ 2.13
PRB3-202ENST00000538488 MYO15BQ96JP2 1530 aa28.02■■■□□ 2.08
PRB3-202ENST00000538488 BICRAQ9NZM4 1560 aa28.01■■■□□ 2.07
PRB3-202ENST00000538488 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
PRB3-202ENST00000538488 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
PRB3-202ENST00000538488 DCAF1Q9Y4B6 1507 aa27.64■■■□□ 2.02
PRB3-202ENST00000538488 SHROOM4Q9ULL8 1493 aa27.52■■■□□ 2
PRB3-202ENST00000538488 CC2D2AQ9P2K1 1620 aa27.51■■□□□ 1.99
PRB3-202ENST00000538488 CECR2Q9BXF3 1484 aa27.43■■□□□ 1.98
PRB3-202ENST00000538488 EIF4G1Q04637 1599 aaKnown RBP27.38■■□□□ 1.97
PRB3-202ENST00000538488 DNAJC5Q9H3Z4 198 aa26.38■■□□□ 1.81
PRB3-202ENST00000538488 ERCC6Q03468 1493 aa26.36■■□□□ 1.81
PRB3-202ENST00000538488 NCAPD3P42695 1498 aa26.34■■□□□ 1.81
PRB3-202ENST00000538488 SMARCA4P51532 1647 aa26.29■■□□□ 1.8
PRB3-202ENST00000538488 ATAD2BQ9ULI0 1458 aa26.29■■□□□ 1.8
PRB3-202ENST00000538488 SMARCA2P51531 1590 aa26.24■■□□□ 1.79
PRB3-202ENST00000538488 CUX2O14529 1486 aa26.24■■□□□ 1.79
PRB3-202ENST00000538488 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
PRB3-202ENST00000538488 NESP48681 1621 aa26.12■■□□□ 1.77
PRB3-202ENST00000538488 BAZ1AQ9NRL2 1556 aaPredicted RBP26.11■■□□□ 1.77
PRB3-202ENST00000538488 BAZ1BQ9UIG0 1483 aaKnown RBP26.11■■□□□ 1.77
PRB3-202ENST00000538488 PEG3Q9GZU2 1588 aa25.93■■□□□ 1.74
PRB3-202ENST00000538488 MROH2BQ7Z745 1585 aa25.9■■□□□ 1.74
PRB3-202ENST00000538488 THOC2Q8NI27 1593 aaKnown RBP25.87■■□□□ 1.73
PRB3-202ENST00000538488 LAMC3Q9Y6N6 1575 aa25.86■■□□□ 1.73
PRB3-202ENST00000538488 KIF21AQ7Z4S6 1674 aa25.85■■□□□ 1.73
PRB3-202ENST00000538488 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
PRB3-202ENST00000538488 WIZO95785 1651 aa25.67■■□□□ 1.7
PRB3-202ENST00000538488 CADPSQ9ULU8 1353 aa25.57■■□□□ 1.68
PRB3-202ENST00000538488 MRC2Q9UBG0 1479 aa25.52■■□□□ 1.68
PRB3-202ENST00000538488 WDR62O43379 1518 aa25.44■■□□□ 1.66
PRB3-202ENST00000538488 CEP164Q9UPV0 1460 aa25.41■■□□□ 1.66
PRB3-202ENST00000538488 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
PRB3-202ENST00000538488 FANCD2Q9BXW9 1451 aa25.34■■□□□ 1.65
PRB3-202ENST00000538488 RSF1Q96T23 1441 aaPredicted RBP25.26■■□□□ 1.63
PRB3-202ENST00000538488 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
PRB3-202ENST00000538488 CFTRP13569 1480 aa25.23■■□□□ 1.63
PRB3-202ENST00000538488 PRDM2Q13029 1718 aa25.15■■□□□ 1.62
PRB3-202ENST00000538488 URB2Q14146 1524 aaKnown RBP25.14■■□□□ 1.62
PRB3-202ENST00000538488 OSCARQ8IYS5 282 aa25.03■■□□□ 1.6
PRB3-202ENST00000538488 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
PRB3-202ENST00000538488 ZNF608Q9ULD9 1512 aaPredicted RBP24.87■■□□□ 1.57
PRB3-202ENST00000538488 IFT140Q96RY7 1462 aa24.86■■□□□ 1.57
PRB3-202ENST00000538488 TOPBP1Q92547 1522 aa24.84■■□□□ 1.57
PRB3-202ENST00000538488 RIMBP3CA6NJZ7 1639 aa24.81■■□□□ 1.56
PRB3-202ENST00000538488 RIMBP3BA6NNM3 1639 aa24.81■■□□□ 1.56
PRB3-202ENST00000538488 RIMBP3Q9UFD9 1639 aa24.81■■□□□ 1.56
PRB3-202ENST00000538488 EIF4G3O43432 1585 aaKnown RBP24.78■■□□□ 1.56
PRB3-202ENST00000538488 DNMBPQ6XZF7 1577 aa24.75■■□□□ 1.55
PRB3-202ENST00000538488 ABCC8Q09428 1581 aa24.73■■□□□ 1.55
PRB3-202ENST00000538488 CHD1O14646 1710 aa24.69■■□□□ 1.54
PRB3-202ENST00000538488 ARHGEF11O15085 1522 aa24.67■■□□□ 1.54
PRB3-202ENST00000538488 TARBP1Q13395 1621 aaKnown RBP24.63■■□□□ 1.53
PRB3-202ENST00000538488 AQRO60306 1485 aaKnown RBP eCLIP24.63■■□□□ 1.53
PRB3-202ENST00000538488 FBLN2P98095 1184 aa24.6■■□□□ 1.53
PRB3-202ENST00000538488 POLA1P09884 1462 aaPredicted RBP24.57■■□□□ 1.52
PRB3-202ENST00000538488 RAD54L2Q9Y4B4 1467 aa24.52■■□□□ 1.52
PRB3-202ENST00000538488 CYB5RLQ6IPT4 315 aa24.52■■□□□ 1.52
PRB3-202ENST00000538488 SOGA1O94964 1423 aa24.46■■□□□ 1.51
PRB3-202ENST00000538488 TDRD9Q8NDG6 1382 aaKnown RBP24.45■■□□□ 1.5
PRB3-202ENST00000538488 FGD5Q6ZNL6 1462 aa24.43■■□□□ 1.5
PRB3-202ENST00000538488 SNAPC4Q5SXM2 1469 aa24.4■■□□□ 1.5
PRB3-202ENST00000538488 ARAP1Q96P48 1450 aa24.4■■□□□ 1.5
PRB3-202ENST00000538488 TRHP20396 242 aaPredicted RBP24.39■■□□□ 1.49
PRB3-202ENST00000538488 CUX1P39880 1505 aa24.35■■□□□ 1.49
PRB3-202ENST00000538488 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
PRB3-202ENST00000538488 CHMP7Q8WUX9 453 aaPredicted RBP24.32■■□□□ 1.48
PRB3-202ENST00000538488 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
PRB3-202ENST00000538488 PBRM1Q86U86 1689 aa24.28■■□□□ 1.48
PRB3-202ENST00000538488 MAGI1Q96QZ7 1491 aaPredicted RBP24.26■■□□□ 1.47
PRB3-202ENST00000538488 CLASP1Q7Z460 1538 aa24.26■■□□□ 1.47
PRB3-202ENST00000538488 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
PRB3-202ENST00000538488 SYNJ2O15056 1496 aa24.19■■□□□ 1.46
PRB3-202ENST00000538488 SUPT5HO00267 1087 aaKnown RBP24.19■■□□□ 1.46
PRB3-202ENST00000538488 GAPVD1Q14C86 1478 aa24.17■■□□□ 1.46
PRB3-202ENST00000538488 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
PRB3-202ENST00000538488 ABCA10Q8WWZ4 1543 aa24.08■■□□□ 1.45
PRB3-202ENST00000538488 WRNQ14191 1432 aaPredicted RBP eCLIP23.97■■□□□ 1.43
PRB3-202ENST00000538488 ADAMTS12P58397 1594 aa23.96■■□□□ 1.43
PRB3-202ENST00000538488 GRIN2AQ12879 1464 aa23.96■■□□□ 1.43
PRB3-202ENST00000538488 BIVM-ERCC5R4GMW8 1640 aa23.95■■□□□ 1.42
PRB3-202ENST00000538488 ERCC6L2Q5T890 1561 aa23.94■■□□□ 1.42
PRB3-202ENST00000538488 TOP2BQ02880 1626 aa23.92■■□□□ 1.42
PRB3-202ENST00000538488 CEP170Q5SW79 1584 aa23.91■■□□□ 1.42
PRB3-202ENST00000538488 FHAD1B1AJZ9 1412 aa23.83■■□□□ 1.4
PRB3-202ENST00000538488 NUP160Q12769 1436 aa23.83■■□□□ 1.4
PRB3-202ENST00000538488 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
PRB3-202ENST00000538488 SHROOM2Q13796 1616 aa23.78■■□□□ 1.4
PRB3-202ENST00000538488 ERICH3Q5RHP9 1530 aa23.78■■□□□ 1.4
PRB3-202ENST00000538488 PRG4Q92954 1404 aaPredicted RBP23.68■■□□□ 1.38
PRB3-202ENST00000538488 KIF13AQ9H1H9 1805 aa23.66■■□□□ 1.38
PRB3-202ENST00000538488 RUSC2Q8N2Y8 1516 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms