Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.42□□□□□ -0.42
GCM1Q9NP62 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 AC104306.2-201ENST00000451877 341 ntBASIC12.42□□□□□ -0.42
GCM1Q9NP62 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 AC022447.6-201ENST00000515522 438 ntBASIC12.42□□□□□ -0.42
GCM1Q9NP62 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 AC007663.3-201ENST00000609632 465 ntBASIC12.42□□□□□ -0.42
GCM1Q9NP62 MIR6720-201ENST00000611664 98 ntBASIC12.42□□□□□ -0.42
GCM1Q9NP62 MIR6869-201ENST00000619434 62 ntBASIC12.42□□□□□ -0.42
GCM1Q9NP62 AL023803.2-201ENST00000620080 638 ntBASIC12.42□□□□□ -0.42
GCM1Q9NP62 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 AC009093.10-201ENST00000641956 1442 ntBASIC12.42□□□□□ -0.42
GCM1Q9NP62 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 LINC00552-201ENST00000625151 2579 ntBASIC12.42□□□□□ -0.42
GCM1Q9NP62 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 AC117489.1-201ENST00000625169 3217 ntBASIC12.42□□□□□ -0.42
GCM1Q9NP62 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 KRT8P29-201ENST00000420409 1371 ntBASIC12.42□□□□□ -0.42
GCM1Q9NP62 KRT8P28-201ENST00000433288 1390 ntBASIC12.42□□□□□ -0.42
GCM1Q9NP62 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.42□□□□□ -0.42
GCM1Q9NP62 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GCM1Q9NP62 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.41□□□□□ -0.42
GCM1Q9NP62 MYADML-201ENST00000474610 2147 ntBASIC12.41□□□□□ -0.42
GCM1Q9NP62 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
GCM1Q9NP62 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
GCM1Q9NP62 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
GCM1Q9NP62 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
GCM1Q9NP62 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
GCM1Q9NP62 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 CSPG4P11-201ENST00000560634 4910 ntBASIC12.41□□□□□ -0.42
GCM1Q9NP62 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
GCM1Q9NP62 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
GCM1Q9NP62 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.41□□□□□ -0.42
GCM1Q9NP62 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.41□□□□□ -0.42
GCM1Q9NP62 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.41□□□□□ -0.42
GCM1Q9NP62 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
GCM1Q9NP62 AC012441.2-201ENST00000444843 739 ntBASIC12.41□□□□□ -0.42
GCM1Q9NP62 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GCM1Q9NP62 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.41□□□□□ -0.42
GCM1Q9NP62 TPT1P11-201ENST00000458482 498 ntBASIC12.41□□□□□ -0.42
GCM1Q9NP62 TUBB8P8-201ENST00000458717 1058 ntBASIC12.41□□□□□ -0.42
GCM1Q9NP62 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms