Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 EIF5AP2-201ENST00000585668 1047 ntBASIC15.38■□□□□ 0.05
RNF135Q8IUD6 SIGLEC18P-201ENST00000602271 909 ntBASIC15.38■□□□□ 0.05
RNF135Q8IUD6 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 AC006158.1-201ENST00000610661 249 ntBASIC15.38■□□□□ 0.05
RNF135Q8IUD6 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 AC244250.3-201ENST00000620749 366 ntBASIC15.38■□□□□ 0.05
RNF135Q8IUD6 AC025262.2-201ENST00000623975 1056 ntBASIC15.38■□□□□ 0.05
RNF135Q8IUD6 Z98259.2-201ENST00000641583 609 ntBASIC15.38■□□□□ 0.05
RNF135Q8IUD6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 AC013726.1-201ENST00000563747 2285 ntBASIC15.38■□□□□ 0.05
RNF135Q8IUD6 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF135Q8IUD6 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 NHP2-202ENST00000314397 599 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 DDX39AP1-201ENST00000445147 1181 ntBASIC15.37■□□□□ 0.05
RNF135Q8IUD6 AC004837.1-201ENST00000446267 564 ntBASIC15.37■□□□□ 0.05
RNF135Q8IUD6 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 NUDT4P2-201ENST00000578341 546 ntBASIC15.37■□□□□ 0.05
RNF135Q8IUD6 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 SNX18-202ENST00000343017 3140 ntBASIC15.37■□□□□ 0.05
RNF135Q8IUD6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 AC067750.1-201ENST00000608826 6545 ntBASIC15.37■□□□□ 0.05
RNF135Q8IUD6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 LINC01101-201ENST00000622953 1884 ntBASIC15.37■□□□□ 0.05
RNF135Q8IUD6 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 FGD5P1-202ENST00000614866 2498 ntBASIC15.37■□□□□ 0.05
RNF135Q8IUD6 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 AC139749.1-202ENST00000617529 3139 ntBASIC15.37■□□□□ 0.05
RNF135Q8IUD6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF135Q8IUD6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 AC015909.3-201ENST00000572855 1794 ntBASIC15.36■□□□□ 0.05
RNF135Q8IUD6 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms