Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNA1P78396 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCNA1P78396 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCNA1P78396 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNA1P78396 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.27■□□□□ 0.2
CCNA1P78396 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNA1P78396 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.27■□□□□ 0.2
CCNA1P78396 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.27■□□□□ 0.2
CCNA1P78396 RN7SL494P-201ENST00000461517 304 ntBASIC16.27■□□□□ 0.2
CCNA1P78396 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNA1P78396 PGAM1P12-201ENST00000505622 748 ntBASIC16.27■□□□□ 0.2
CCNA1P78396 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
CCNA1P78396 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC16.27■□□□□ 0.2
CCNA1P78396 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNA1P78396 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.27■□□□□ 0.2
CCNA1P78396 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNA1P78396 RN7SL596P-201ENST00000582123 288 ntBASIC16.27■□□□□ 0.2
CCNA1P78396 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNA1P78396 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.27■□□□□ 0.2
CCNA1P78396 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.27■□□□□ 0.2
CCNA1P78396 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.27■□□□□ 0.2
CCNA1P78396 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNA1P78396 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNA1P78396 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNA1P78396 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCNA1P78396 AL354702.1-201ENST00000442006 1960 ntBASIC16.27■□□□□ 0.19
CCNA1P78396 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CCNA1P78396 AL513477.1-201ENST00000602865 2407 ntBASIC16.27■□□□□ 0.19
CCNA1P78396 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCNA1P78396 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CCNA1P78396 AC006486.2-201ENST00000624246 2199 ntBASIC16.27■□□□□ 0.19
CCNA1P78396 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CCNA1P78396 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
CCNA1P78396 AC018529.2-202ENST00000611482 3087 ntBASIC16.27■□□□□ 0.19
CCNA1P78396 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCNA1P78396 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCNA1P78396 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCNA1P78396 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16.26■□□□□ 0.19
CCNA1P78396 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.26■□□□□ 0.19
CCNA1P78396 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCNA1P78396 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 LINC00115-201ENST00000473798 1317 ntBASIC16.26■□□□□ 0.19
CCNA1P78396 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.26■□□□□ 0.19
CCNA1P78396 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCNA1P78396 AC068418.2-201ENST00000577309 3703 ntBASIC16.26■□□□□ 0.19
CCNA1P78396 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.26■□□□□ 0.19
CCNA1P78396 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC16.26■□□□□ 0.19
CCNA1P78396 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CCNA1P78396 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.26■□□□□ 0.19
CCNA1P78396 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 IGHV1-12-201ENST00000518307 205 ntBASIC16.26■□□□□ 0.19
CCNA1P78396 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC16.26■□□□□ 0.19
CCNA1P78396 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.26■□□□□ 0.19
CCNA1P78396 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CCNA1P78396 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCNA1P78396 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CCNA1P78396 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.26■□□□□ 0.19
CCNA1P78396 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
CCNA1P78396 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.26■□□□□ 0.19
CCNA1P78396 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.26■□□□□ 0.19
CCNA1P78396 AC092053.3-201ENST00000641308 4975 ntBASIC16.26■□□□□ 0.19
CCNA1P78396 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.26■□□□□ 0.19
CCNA1P78396 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCNA1P78396 ODCP-201ENST00000459650 1639 ntBASIC16.26■□□□□ 0.19
CCNA1P78396 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CCNA1P78396 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.26■□□□□ 0.19
CCNA1P78396 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCNA1P78396 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNA1P78396 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.25■□□□□ 0.19
CCNA1P78396 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNA1P78396 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNA1P78396 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCNA1P78396 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNA1P78396 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNA1P78396 RPL13AP3-202ENST00000494676 1473 ntBASIC16.25■□□□□ 0.19
CCNA1P78396 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCNA1P78396 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.25■□□□□ 0.19
CCNA1P78396 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNA1P78396 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.25■□□□□ 0.19
CCNA1P78396 SLC25A15P3-201ENST00000505530 290 ntBASIC16.25■□□□□ 0.19
CCNA1P78396 AC093826.1-201ENST00000508655 993 ntBASIC16.25■□□□□ 0.19
CCNA1P78396 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC16.25■□□□□ 0.19
CCNA1P78396 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCNA1P78396 VENTXP3-201ENST00000546480 773 ntBASIC16.25■□□□□ 0.19
CCNA1P78396 AL512310.5-201ENST00000551999 515 ntBASIC16.25■□□□□ 0.19
CCNA1P78396 DNM1P51-201ENST00000558149 522 ntBASIC16.25■□□□□ 0.19
CCNA1P78396 MIR4265-201ENST00000582152 99 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms