Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ASIC1P78348 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ASIC1P78348 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ASIC1P78348 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ASIC1P78348 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.16■□□□□ 0.18
ASIC1P78348 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
ASIC1P78348 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ASIC1P78348 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ASIC1P78348 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.16■□□□□ 0.18
ASIC1P78348 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ASIC1P78348 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.16■□□□□ 0.18
ASIC1P78348 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.16■□□□□ 0.18
ASIC1P78348 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.16■□□□□ 0.18
ASIC1P78348 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ASIC1P78348 AC119751.2-201ENST00000504529 210 ntBASIC16.16■□□□□ 0.18
ASIC1P78348 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.16■□□□□ 0.18
ASIC1P78348 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.16■□□□□ 0.18
ASIC1P78348 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ASIC1P78348 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.16■□□□□ 0.18
ASIC1P78348 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ASIC1P78348 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.16■□□□□ 0.18
ASIC1P78348 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ASIC1P78348 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ASIC1P78348 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
ASIC1P78348 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ASIC1P78348 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.15■□□□□ 0.18
ASIC1P78348 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
ASIC1P78348 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ASIC1P78348 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.15■□□□□ 0.18
ASIC1P78348 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ASIC1P78348 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.15■□□□□ 0.18
ASIC1P78348 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ASIC1P78348 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ASIC1P78348 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 KRT223P-202ENST00000449164 1292 ntBASIC16.15■□□□□ 0.18
ASIC1P78348 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.15■□□□□ 0.18
ASIC1P78348 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.15■□□□□ 0.18
ASIC1P78348 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.15■□□□□ 0.18
ASIC1P78348 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 AP005482.1-201ENST00000563722 1273 ntBASIC16.15■□□□□ 0.18
ASIC1P78348 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.15■□□□□ 0.18
ASIC1P78348 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.15■□□□□ 0.18
ASIC1P78348 COX11-210ENST00000639671 696 ntBASIC16.15■□□□□ 0.18
ASIC1P78348 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ASIC1P78348 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 LINC02486-201ENST00000604157 3000 ntBASIC16.15■□□□□ 0.18
ASIC1P78348 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.15■□□□□ 0.18
ASIC1P78348 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ASIC1P78348 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
ASIC1P78348 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ASIC1P78348 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ASIC1P78348 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.14■□□□□ 0.17
ASIC1P78348 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ASIC1P78348 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.14■□□□□ 0.17
ASIC1P78348 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ASIC1P78348 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.14■□□□□ 0.17
ASIC1P78348 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.14■□□□□ 0.17
ASIC1P78348 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ASIC1P78348 AL354877.1-201ENST00000424412 413 ntBASIC16.14■□□□□ 0.17
ASIC1P78348 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.14■□□□□ 0.17
ASIC1P78348 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.14■□□□□ 0.17
ASIC1P78348 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ASIC1P78348 DUX4L45-201ENST00000566406 1057 ntBASIC16.14■□□□□ 0.17
ASIC1P78348 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.14■□□□□ 0.17
ASIC1P78348 AC009542.2-202ENST00000619004 1067 ntBASIC16.14■□□□□ 0.17
ASIC1P78348 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ASIC1P78348 AL162426.1-201ENST00000624141 743 ntBASIC16.14■□□□□ 0.17
ASIC1P78348 Z98259.2-201ENST00000641583 609 ntBASIC16.14■□□□□ 0.17
ASIC1P78348 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASIC1P78348 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ASIC1P78348 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms