Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.7■□□□□ 0.26
SHROOM1Q2M3G4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 RN7SL564P-201ENST00000496309 250 ntBASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 OR5BD1P-201ENST00000532527 817 ntBASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 LINC00431-202ENST00000636375 159 ntBASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM1Q2M3G4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 AC108734.2-201ENST00000420887 1069 ntBASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 RN7SL396P-201ENST00000471086 295 ntBASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 KRT8P18-201ENST00000413425 1445 ntBASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 HSPA8P5-201ENST00000456928 2069 ntBASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms