Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
AP3S2P59780 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.48□□□□□ -0.41
AP3S2P59780 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
AP3S2P59780 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
AP3S2P59780 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
AP3S2P59780 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP3S2P59780 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
AP3S2P59780 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 CETN4P-206ENST00000642099 2168 ntBASIC12.47□□□□□ -0.41
AP3S2P59780 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 AL022323.5-201ENST00000624101 2059 ntBASIC12.47□□□□□ -0.41
AP3S2P59780 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
AP3S2P59780 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
AP3S2P59780 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
AP3S2P59780 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
AP3S2P59780 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
AP3S2P59780 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.47□□□□□ -0.41
AP3S2P59780 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S2P59780 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.47□□□□□ -0.41
AP3S2P59780 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S2P59780 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 UNC93B7-201ENST00000509439 705 ntBASIC12.47□□□□□ -0.41
AP3S2P59780 RNA5SP416-201ENST00000516838 111 ntBASIC12.47□□□□□ -0.41
AP3S2P59780 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
AP3S2P59780 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.47□□□□□ -0.41
AP3S2P59780 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.47□□□□□ -0.41
AP3S2P59780 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S2P59780 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
AP3S2P59780 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.47□□□□□ -0.41
AP3S2P59780 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.47□□□□□ -0.41
AP3S2P59780 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S2P59780 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 AL589739.1-201ENST00000607720 493 ntBASIC12.47□□□□□ -0.41
AP3S2P59780 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.47□□□□□ -0.41
AP3S2P59780 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.47□□□□□ -0.41
AP3S2P59780 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.47□□□□□ -0.41
AP3S2P59780 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
AP3S2P59780 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
AP3S2P59780 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S2P59780 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.47□□□□□ -0.41
AP3S2P59780 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.47□□□□□ -0.41
AP3S2P59780 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
AP3S2P59780 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP3S2P59780 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.47□□□□□ -0.41
AP3S2P59780 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 AC003102.2-201ENST00000589195 1469 ntBASIC12.46□□□□□ -0.41
AP3S2P59780 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.46□□□□□ -0.41
AP3S2P59780 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.46□□□□□ -0.41
AP3S2P59780 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
AP3S2P59780 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
AP3S2P59780 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
AP3S2P59780 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP3S2P59780 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.46□□□□□ -0.41
AP3S2P59780 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms