RNA–Protein interactions for RNA: ENST00000545703.5

KLHL13-209, Transcript of kelch like family member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KLHL13, Length 3,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL13-209ENST00000545703 NISCHQ9Y2I1 1504 aa27.22■■□□□ 1.95
KLHL13-209ENST00000545703 SHROOM4Q9ULL8 1493 aa24.41■■□□□ 1.5
KLHL13-209ENST00000545703 SUPT5HO00267 1087 aaKnown RBP24.07■■□□□ 1.44
KLHL13-209ENST00000545703 DCAF8L2P0C7V8 631 aa23.95■■□□□ 1.43
KLHL13-209ENST00000545703 CHIC1Q5VXU3 224 aa22.93■■□□□ 1.26
KLHL13-209ENST00000545703 ZCCHC6Q5VYS8 1495 aaKnown RBP22.93■■□□□ 1.26
KLHL13-209ENST00000545703 PCGF6Q9BYE7 350 aa22.82■■□□□ 1.24
KLHL13-209ENST00000545703 MYO15BQ96JP2 1530 aa22.75■■□□□ 1.23
KLHL13-209ENST00000545703 LOC105371045A0A1W2PR82 267 aa22.67■■□□□ 1.22
KLHL13-209ENST00000545703 EHMT2Q96KQ7 1210 aa22.61■■□□□ 1.21
KLHL13-209ENST00000545703 CCDC180Q9P1Z9 1646 aa22.6■■□□□ 1.21
KLHL13-209ENST00000545703 PPARGC1BQ86YN6 1023 aaKnown RBP22.47■■□□□ 1.19
KLHL13-209ENST00000545703 HRCP23327 699 aa22.46■■□□□ 1.19
KLHL13-209ENST00000545703 FAM9AQ8IZU1 332 aaPredicted RBP22.41■■□□□ 1.18
KLHL13-209ENST00000545703 TRIM41Q8WV44 630 aa22.12■■□□□ 1.13
KLHL13-209ENST00000545703 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
KLHL13-209ENST00000545703 TRIM26Q12899 539 aaPredicted RBP21.91■■□□□ 1.1
KLHL13-209ENST00000545703 ABCC9O60706 1549 aa21.88■■□□□ 1.09
KLHL13-209ENST00000545703 DCAF1Q9Y4B6 1507 aa21.84■■□□□ 1.09
KLHL13-209ENST00000545703 TTBK1Q5TCY1 1321 aaPredicted RBP21.83■■□□□ 1.09
KLHL13-209ENST00000545703 RSF1Q96T23 1441 aaPredicted RBP21.79■■□□□ 1.08
KLHL13-209ENST00000545703 RB1CC1Q8TDY2 1594 aa21.6■■□□□ 1.05
KLHL13-209ENST00000545703 CECR2Q9BXF3 1484 aa21.58■■□□□ 1.04
KLHL13-209ENST00000545703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.43■■□□□ 1.02
KLHL13-209ENST00000545703 MROH2BQ7Z745 1585 aa21.37■■□□□ 1.01
KLHL13-209ENST00000545703 CCER1Q8TC90 406 aaPredicted RBP21.34■■□□□ 1.01
KLHL13-209ENST00000545703 ZEB1P37275 1124 aaPredicted RBP21.33■■□□□ 1.01
KLHL13-209ENST00000545703 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 1
KLHL13-209ENST00000545703 RANGAP1P46060 587 aaPredicted RBP21.28■■□□□ 1
KLHL13-209ENST00000545703 WIZO95785 1651 aa21.25■□□□□ 0.99
KLHL13-209ENST00000545703 UBTFP17480 764 aaKnown RBP21.23■□□□□ 0.99
KLHL13-209ENST00000545703 NACADO15069 1562 aa21.11■□□□□ 0.97
KLHL13-209ENST00000545703 ABCC8Q09428 1581 aa21.04■□□□□ 0.96
KLHL13-209ENST00000545703 CCDC88BA6NC98 1476 aa20.96■□□□□ 0.95
KLHL13-209ENST00000545703 HNRNPUL2Q1KMD3 747 aaKnown RBP20.94■□□□□ 0.94
KLHL13-209ENST00000545703 SCAF1Q9H7N4 1312 aaKnown RBP20.94■□□□□ 0.94
KLHL13-209ENST00000545703 SOGA1O94964 1423 aa20.93■□□□□ 0.94
KLHL13-209ENST00000545703 CSRNP3Q8WYN3 585 aa20.89■□□□□ 0.93
KLHL13-209ENST00000545703 BAZ1AQ9NRL2 1556 aaPredicted RBP20.86■□□□□ 0.93
KLHL13-209ENST00000545703 DIEXFQ68CQ4 756 aaKnown RBP20.84■□□□□ 0.93
KLHL13-209ENST00000545703 YTHDC1Q96MU7 727 aaKnown RBP20.84■□□□□ 0.93
KLHL13-209ENST00000545703 RUSC2Q8N2Y8 1516 aa20.83■□□□□ 0.92
KLHL13-209ENST00000545703 CEP162Q5TB80 1403 aa20.81■□□□□ 0.92
KLHL13-209ENST00000545703 APLP2Q06481 763 aa20.74■□□□□ 0.91
KLHL13-209ENST00000545703 NEUROD1Q13562 356 aa20.73■□□□□ 0.91
KLHL13-209ENST00000545703 TOP2AP11388 1531 aaKnown RBP20.66■□□□□ 0.9
KLHL13-209ENST00000545703 SMARCA4P51532 1647 aa20.65■□□□□ 0.9
KLHL13-209ENST00000545703 SMARCA2P51531 1590 aa20.62■□□□□ 0.89
KLHL13-209ENST00000545703 GTF3C3Q9Y5Q9 886 aa20.62■□□□□ 0.89
KLHL13-209ENST00000545703 ACIN1Q9UKV3 1341 aaKnown RBP20.61■□□□□ 0.89
KLHL13-209ENST00000545703 TNIKQ9UKE5 1360 aa20.59■□□□□ 0.89
KLHL13-209ENST00000545703 WRNQ14191 1432 aaPredicted RBP eCLIP20.57■□□□□ 0.88
KLHL13-209ENST00000545703 CENPBP07199 599 aaPredicted RBP20.56■□□□□ 0.88
KLHL13-209ENST00000545703 ITGAEP38570 1179 aa20.53■□□□□ 0.88
KLHL13-209ENST00000545703 EIF4G1Q04637 1599 aaKnown RBP20.5■□□□□ 0.87
KLHL13-209ENST00000545703 ZNF316A6NFI3 1004 aaPredicted RBP20.5■□□□□ 0.87
KLHL13-209ENST00000545703 GOLGA3Q08378 1498 aa20.46■□□□□ 0.87
KLHL13-209ENST00000545703 CLIP1P30622 1438 aa20.44■□□□□ 0.86
KLHL13-209ENST00000545703 UNC13AQ9UPW8 1703 aa20.43■□□□□ 0.86
KLHL13-209ENST00000545703 MIER1Q8N108 512 aa20.4■□□□□ 0.86
KLHL13-209ENST00000545703 EEA1Q15075 1411 aa20.36■□□□□ 0.85
KLHL13-209ENST00000545703 ATP1B4Q9UN42 357 aaPredicted RBP20.35■□□□□ 0.85
KLHL13-209ENST00000545703 BAZ1BQ9UIG0 1483 aaKnown RBP20.33■□□□□ 0.84
KLHL13-209ENST00000545703 RAPGEF2Q9Y4G8 1499 aa20.32■□□□□ 0.84
KLHL13-209ENST00000545703 SYNJ1O43426 1573 aa20.3■□□□□ 0.84
KLHL13-209ENST00000545703 CEP164Q9UPV0 1460 aa20.29■□□□□ 0.84
KLHL13-209ENST00000545703 PELP1Q8IZL8 1130 aaKnown RBP20.28■□□□□ 0.84
KLHL13-209ENST00000545703 BICRAQ9NZM4 1560 aa20.26■□□□□ 0.83
KLHL13-209ENST00000545703 ATAD2BQ9ULI0 1458 aa20.25■□□□□ 0.83
KLHL13-209ENST00000545703 KANK4Q5T7N3 995 aaPredicted RBP20.24■□□□□ 0.83
KLHL13-209ENST00000545703 P3H3Q8IVL6 736 aa20.19■□□□□ 0.82
KLHL13-209ENST00000545703 VPS8Q8N3P4 1428 aa20.18■□□□□ 0.82
KLHL13-209ENST00000545703 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
KLHL13-209ENST00000545703 KIF21BO75037 1637 aa20.02■□□□□ 0.8
KLHL13-209ENST00000545703 HIRIP3Q9BW71 556 aaPredicted RBP19.97■□□□□ 0.79
KLHL13-209ENST00000545703 DHX57Q6P158 1386 aaKnown RBP19.91■□□□□ 0.78
KLHL13-209ENST00000545703 KIF27Q86VH2 1401 aa19.9■□□□□ 0.78
KLHL13-209ENST00000545703 ARAP1Q96P48 1450 aa19.9■□□□□ 0.78
KLHL13-209ENST00000545703 PEG3Q9GZU2 1588 aa19.89■□□□□ 0.78
KLHL13-209ENST00000545703 SIN3AQ96ST3 1273 aa19.87■□□□□ 0.77
KLHL13-209ENST00000545703 KCNH8Q96L42 1107 aa19.86■□□□□ 0.77
KLHL13-209ENST00000545703 BCANQ96GW7 911 aa19.84■□□□□ 0.77
KLHL13-209ENST00000545703 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
KLHL13-209ENST00000545703 CUX2O14529 1486 aa19.82■□□□□ 0.76
KLHL13-209ENST00000545703 CCNB3Q8WWL7 1395 aa19.81■□□□□ 0.76
KLHL13-209ENST00000545703 CUX1P39880 1505 aa19.81■□□□□ 0.76
KLHL13-209ENST00000545703 DDX10Q13206 875 aaKnown RBP19.81■□□□□ 0.76
KLHL13-209ENST00000545703 PRXQ9BXM0 1461 aa19.8■□□□□ 0.76
KLHL13-209ENST00000545703 ARID3CA6NKF2 412 aa19.76■□□□□ 0.75
KLHL13-209ENST00000545703 RAB3GAP2Q9H2M9 1393 aa19.73■□□□□ 0.75
KLHL13-209ENST00000545703 ARHGAP35Q9NRY4 1499 aa19.72■□□□□ 0.75
KLHL13-209ENST00000545703 CARMIL1Q5VZK9 1371 aa19.71■□□□□ 0.75
KLHL13-209ENST00000545703 IGF1RP08069 1367 aa19.69■□□□□ 0.74
KLHL13-209ENST00000545703 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
KLHL13-209ENST00000545703 SUPT16HQ9Y5B9 1047 aaKnown RBP19.64■□□□□ 0.73
KLHL13-209ENST00000545703 CLSPNQ9HAW4 1339 aa19.64■□□□□ 0.73
KLHL13-209ENST00000545703 TRIM52Q96A61 297 aa19.63■□□□□ 0.73
KLHL13-209ENST00000545703 ERICH3Q5RHP9 1530 aa19.63■□□□□ 0.73
KLHL13-209ENST00000545703 CFTRP13569 1480 aa19.61■□□□□ 0.73
KLHL13-209ENST00000545703 BIVM-ERCC5R4GMW8 1640 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms