Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.03□□□□□ -0.16
HOXA6P31267 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
HOXA6P31267 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HOXA6P31267 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 OR10N1P-201ENST00000392758 869 ntBASIC14.03□□□□□ -0.16
HOXA6P31267 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 RPL3P2-204ENST00000413027 1203 ntBASIC14.03□□□□□ -0.16
HOXA6P31267 PGAM1P11-201ENST00000416729 680 ntBASIC14.03□□□□□ -0.16
HOXA6P31267 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.03□□□□□ -0.16
HOXA6P31267 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC14.03□□□□□ -0.16
HOXA6P31267 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC14.03□□□□□ -0.16
HOXA6P31267 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.03□□□□□ -0.16
HOXA6P31267 AC092903.1-201ENST00000466506 262 ntBASIC14.03□□□□□ -0.16
HOXA6P31267 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14.03□□□□□ -0.16
HOXA6P31267 ALG1L7P-201ENST00000502317 768 ntBASIC14.03□□□□□ -0.16
HOXA6P31267 IGHEP2-201ENST00000519308 1256 ntBASIC14.03□□□□□ -0.16
HOXA6P31267 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC14.03□□□□□ -0.16
HOXA6P31267 MED11-202ENST00000573708 802 ntTSL 2 BASIC14.03□□□□□ -0.16
HOXA6P31267 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.03□□□□□ -0.16
HOXA6P31267 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC14.03□□□□□ -0.16
HOXA6P31267 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.03□□□□□ -0.16
HOXA6P31267 AC011462.4-201ENST00000616866 449 ntBASIC14.03□□□□□ -0.16
HOXA6P31267 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.03□□□□□ -0.16
HOXA6P31267 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HOXA6P31267 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.03□□□□□ -0.16
HOXA6P31267 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.03□□□□□ -0.16
HOXA6P31267 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
HOXA6P31267 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.03□□□□□ -0.16
HOXA6P31267 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.03□□□□□ -0.16
HOXA6P31267 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.03□□□□□ -0.16
HOXA6P31267 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HOXA6P31267 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HOXA6P31267 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.03□□□□□ -0.16
HOXA6P31267 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXA6P31267 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HOXA6P31267 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HOXA6P31267 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.02□□□□□ -0.16
HOXA6P31267 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HOXA6P31267 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HOXA6P31267 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HOXA6P31267 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.16
HOXA6P31267 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.02□□□□□ -0.16
HOXA6P31267 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.02□□□□□ -0.16
HOXA6P31267 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HOXA6P31267 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.02□□□□□ -0.16
HOXA6P31267 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
HOXA6P31267 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HOXA6P31267 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HOXA6P31267 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HOXA6P31267 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.02□□□□□ -0.16
HOXA6P31267 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.02□□□□□ -0.16
HOXA6P31267 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.02□□□□□ -0.16
HOXA6P31267 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HOXA6P31267 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HOXA6P31267 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HOXA6P31267 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HOXA6P31267 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HOXA6P31267 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HOXA6P31267 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.02□□□□□ -0.17
HOXA6P31267 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC14.02□□□□□ -0.17
HOXA6P31267 AC104961.1-201ENST00000427605 771 ntBASIC14.02□□□□□ -0.17
HOXA6P31267 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC14.02□□□□□ -0.17
HOXA6P31267 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC14.02□□□□□ -0.17
HOXA6P31267 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.02□□□□□ -0.17
HOXA6P31267 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.02□□□□□ -0.17
HOXA6P31267 MT3-202ENST00000561640 514 ntTSL 3 BASIC14.02□□□□□ -0.17
HOXA6P31267 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC14.02□□□□□ -0.17
HOXA6P31267 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms