Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 AC012617.1-204ENST00000586340 2305 ntBASIC12.59□□□□□ -0.39
CBX5P45973 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CBX5P45973 AL138709.1-201ENST00000614840 1693 ntBASIC12.59□□□□□ -0.39
CBX5P45973 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.59□□□□□ -0.39
CBX5P45973 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.59□□□□□ -0.39
CBX5P45973 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.59□□□□□ -0.39
CBX5P45973 YBX1P5-201ENST00000509441 847 ntBASIC12.59□□□□□ -0.39
CBX5P45973 PGAM5P1-201ENST00000518923 814 ntBASIC12.59□□□□□ -0.39
CBX5P45973 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.59□□□□□ -0.39
CBX5P45973 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.59□□□□□ -0.39
CBX5P45973 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.59□□□□□ -0.39
CBX5P45973 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.59□□□□□ -0.39
CBX5P45973 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
CBX5P45973 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.59□□□□□ -0.39
CBX5P45973 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.59□□□□□ -0.39
CBX5P45973 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CBX5P45973 AC023794.5-201ENST00000564380 2157 ntBASIC12.59□□□□□ -0.39
CBX5P45973 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CBX5P45973 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.59□□□□□ -0.39
CBX5P45973 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
CBX5P45973 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.58□□□□□ -0.39
CBX5P45973 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
CBX5P45973 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CBX5P45973 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CBX5P45973 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.58□□□□□ -0.39
CBX5P45973 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CBX5P45973 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CBX5P45973 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CBX5P45973 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
CBX5P45973 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
CBX5P45973 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.58□□□□□ -0.4
CBX5P45973 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CBX5P45973 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CBX5P45973 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.58□□□□□ -0.4
CBX5P45973 AC007969.1-201ENST00000433675 447 ntBASIC12.58□□□□□ -0.4
CBX5P45973 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.58□□□□□ -0.4
CBX5P45973 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.58□□□□□ -0.4
CBX5P45973 DUX4L47-201ENST00000566374 394 ntBASIC12.58□□□□□ -0.4
CBX5P45973 AC092337.1-201ENST00000568699 1129 ntBASIC12.58□□□□□ -0.4
CBX5P45973 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.58□□□□□ -0.4
CBX5P45973 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.58□□□□□ -0.4
CBX5P45973 AC010969.2-201ENST00000602458 3231 ntBASIC12.58□□□□□ -0.4
CBX5P45973 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.58□□□□□ -0.4
CBX5P45973 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.58□□□□□ -0.4
CBX5P45973 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CBX5P45973 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CBX5P45973 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CBX5P45973 AC010536.1-201ENST00000538868 2611 ntBASIC12.58□□□□□ -0.4
CBX5P45973 CICP7-201ENST00000432723 2477 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms