Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
ATF1P18846 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ATF1P18846 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATF1P18846 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ATF1P18846 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.78□□□□□ -0.36
ATF1P18846 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ATF1P18846 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
ATF1P18846 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.78□□□□□ -0.36
ATF1P18846 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 PCDHB18P-202ENST00000526308 3197 ntBASIC12.78□□□□□ -0.36
ATF1P18846 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.78□□□□□ -0.36
ATF1P18846 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 DMBT1P1-203ENST00000636837 4628 ntBASIC12.78□□□□□ -0.36
ATF1P18846 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.78□□□□□ -0.36
ATF1P18846 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
ATF1P18846 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
ATF1P18846 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.78□□□□□ -0.36
ATF1P18846 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.78□□□□□ -0.36
ATF1P18846 SERBP1P5-201ENST00000510079 1181 ntBASIC12.78□□□□□ -0.36
ATF1P18846 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.78□□□□□ -0.36
ATF1P18846 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 CLUHP6-201ENST00000580789 941 ntBASIC12.78□□□□□ -0.36
ATF1P18846 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ATF1P18846 AL132655.2-201ENST00000596276 594 ntBASIC12.78□□□□□ -0.36
ATF1P18846 CHCHD2P3-201ENST00000603038 451 ntBASIC12.78□□□□□ -0.36
ATF1P18846 AC004233.3-201ENST00000607794 1269 ntBASIC12.78□□□□□ -0.36
ATF1P18846 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ATF1P18846 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.78□□□□□ -0.36
ATF1P18846 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ATF1P18846 AL118506.1-201ENST00000601296 3082 ntBASIC12.78□□□□□ -0.36
ATF1P18846 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.78□□□□□ -0.36
ATF1P18846 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ATF1P18846 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.78□□□□□ -0.36
ATF1P18846 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.78□□□□□ -0.36
ATF1P18846 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 CR383656.2-201ENST00000548656 2254 ntBASIC12.78□□□□□ -0.36
ATF1P18846 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.78□□□□□ -0.36
ATF1P18846 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 AL031595.1-201ENST00000623969 4709 ntBASIC12.78□□□□□ -0.36
ATF1P18846 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
ATF1P18846 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 AP002761.4-201ENST00000565433 3361 ntBASIC12.78□□□□□ -0.36
ATF1P18846 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
ATF1P18846 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
ATF1P18846 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.78□□□□□ -0.36
ATF1P18846 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATF1P18846 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ATF1P18846 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
ATF1P18846 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.77□□□□□ -0.36
ATF1P18846 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.77□□□□□ -0.36
ATF1P18846 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
ATF1P18846 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATF1P18846 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.77□□□□□ -0.36
ATF1P18846 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.77□□□□□ -0.36
ATF1P18846 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.77□□□□□ -0.36
ATF1P18846 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATF1P18846 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.77□□□□□ -0.36
ATF1P18846 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATF1P18846 KHSRPP1-201ENST00000427983 1768 ntBASIC12.77□□□□□ -0.36
ATF1P18846 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
ATF1P18846 AGAP12P-201ENST00000585227 2359 ntBASIC12.77□□□□□ -0.36
ATF1P18846 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ATF1P18846 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.77□□□□□ -0.37
ATF1P18846 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.77□□□□□ -0.37
ATF1P18846 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.77□□□□□ -0.37
ATF1P18846 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.77□□□□□ -0.37
ATF1P18846 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.77□□□□□ -0.37
ATF1P18846 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.77□□□□□ -0.37
ATF1P18846 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
ATF1P18846 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATF1P18846 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms