RNA–Protein interactions for RNA: ENST00000421646.1

XIRP1-203, Transcript of xin actin binding repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene XIRP1, Length 2,596 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-203ENST00000421646 NISCHQ9Y2I1 1504 aa28.68■■■□□ 2.18
XIRP1-203ENST00000421646 SHROOM4Q9ULL8 1493 aa24.44■■□□□ 1.5
XIRP1-203ENST00000421646 CCDC180Q9P1Z9 1646 aa24.37■■□□□ 1.49
XIRP1-203ENST00000421646 ZCCHC6Q5VYS8 1495 aaKnown RBP24.28■■□□□ 1.48
XIRP1-203ENST00000421646 SUPT5HO00267 1087 aaKnown RBP24.01■■□□□ 1.43
XIRP1-203ENST00000421646 DCAF8L2P0C7V8 631 aa23.7■■□□□ 1.38
XIRP1-203ENST00000421646 DCAF1Q9Y4B6 1507 aa23.56■■□□□ 1.36
XIRP1-203ENST00000421646 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
XIRP1-203ENST00000421646 MYO15BQ96JP2 1530 aa23.34■■□□□ 1.33
XIRP1-203ENST00000421646 ABCC9O60706 1549 aa22.92■■□□□ 1.26
XIRP1-203ENST00000421646 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
XIRP1-203ENST00000421646 HRCP23327 699 aa22.8■■□□□ 1.24
XIRP1-203ENST00000421646 RSF1Q96T23 1441 aaPredicted RBP22.73■■□□□ 1.23
XIRP1-203ENST00000421646 PCGF6Q9BYE7 350 aa22.72■■□□□ 1.23
XIRP1-203ENST00000421646 LOC105371045A0A1W2PR82 267 aa22.71■■□□□ 1.23
XIRP1-203ENST00000421646 NACADO15069 1562 aa22.51■■□□□ 1.19
XIRP1-203ENST00000421646 RB1CC1Q8TDY2 1594 aa22.49■■□□□ 1.19
XIRP1-203ENST00000421646 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
XIRP1-203ENST00000421646 CECR2Q9BXF3 1484 aa22.36■■□□□ 1.17
XIRP1-203ENST00000421646 TRIM26Q12899 539 aaPredicted RBP22.31■■□□□ 1.16
XIRP1-203ENST00000421646 MROH2BQ7Z745 1585 aa22.3■■□□□ 1.16
XIRP1-203ENST00000421646 PPARGC1BQ86YN6 1023 aaKnown RBP22.29■■□□□ 1.16
XIRP1-203ENST00000421646 WIZO95785 1651 aa22.18■■□□□ 1.14
XIRP1-203ENST00000421646 FAM9AQ8IZU1 332 aaPredicted RBP22.17■■□□□ 1.14
XIRP1-203ENST00000421646 BAZ1AQ9NRL2 1556 aaPredicted RBP22.05■■□□□ 1.12
XIRP1-203ENST00000421646 EHMT2Q96KQ7 1210 aa21.95■■□□□ 1.11
XIRP1-203ENST00000421646 EIF4G1Q04637 1599 aaKnown RBP21.94■■□□□ 1.1
XIRP1-203ENST00000421646 TOP2AP11388 1531 aaKnown RBP21.84■■□□□ 1.09
XIRP1-203ENST00000421646 ZEB1P37275 1124 aaPredicted RBP21.84■■□□□ 1.09
XIRP1-203ENST00000421646 SMARCA4P51532 1647 aa21.83■■□□□ 1.09
XIRP1-203ENST00000421646 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
XIRP1-203ENST00000421646 CCDC88BA6NC98 1476 aa21.75■■□□□ 1.07
XIRP1-203ENST00000421646 SMARCA2P51531 1590 aa21.73■■□□□ 1.07
XIRP1-203ENST00000421646 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
XIRP1-203ENST00000421646 BICRAQ9NZM4 1560 aa21.54■■□□□ 1.04
XIRP1-203ENST00000421646 SOGA1O94964 1423 aa21.51■■□□□ 1.03
XIRP1-203ENST00000421646 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
XIRP1-203ENST00000421646 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
XIRP1-203ENST00000421646 CEP162Q5TB80 1403 aa21.44■■□□□ 1.02
XIRP1-203ENST00000421646 PEG3Q9GZU2 1588 aa21.43■■□□□ 1.02
XIRP1-203ENST00000421646 EEA1Q15075 1411 aa21.42■■□□□ 1.02
XIRP1-203ENST00000421646 TNIKQ9UKE5 1360 aa21.42■■□□□ 1.02
XIRP1-203ENST00000421646 RUSC2Q8N2Y8 1516 aa21.41■■□□□ 1.02
XIRP1-203ENST00000421646 CSRNP3Q8WYN3 585 aa21.4■■□□□ 1.02
XIRP1-203ENST00000421646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.38■■□□□ 1.01
XIRP1-203ENST00000421646 CCER1Q8TC90 406 aaPredicted RBP21.32■■□□□ 1
XIRP1-203ENST00000421646 UBTFP17480 764 aaKnown RBP21.29■■□□□ 1
XIRP1-203ENST00000421646 GOLGA3Q08378 1498 aa21.28■■□□□ 1
XIRP1-203ENST00000421646 TTBK1Q5TCY1 1321 aaPredicted RBP21.26■□□□□ 0.99
XIRP1-203ENST00000421646 ATAD2BQ9ULI0 1458 aa21.25■□□□□ 0.99
XIRP1-203ENST00000421646 SYNJ1O43426 1573 aa21.23■□□□□ 0.99
XIRP1-203ENST00000421646 BAZ1BQ9UIG0 1483 aaKnown RBP21.19■□□□□ 0.98
XIRP1-203ENST00000421646 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
XIRP1-203ENST00000421646 KIF21BO75037 1637 aa21.14■□□□□ 0.97
XIRP1-203ENST00000421646 CLIP1P30622 1438 aa21.03■□□□□ 0.96
XIRP1-203ENST00000421646 SCAF1Q9H7N4 1312 aaKnown RBP21.02■□□□□ 0.96
XIRP1-203ENST00000421646 RAPGEF2Q9Y4G8 1499 aa20.99■□□□□ 0.95
XIRP1-203ENST00000421646 TOP2BQ02880 1626 aa20.98■□□□□ 0.95
XIRP1-203ENST00000421646 VPS8Q8N3P4 1428 aa20.96■□□□□ 0.95
XIRP1-203ENST00000421646 DIEXFQ68CQ4 756 aaKnown RBP20.94■□□□□ 0.94
XIRP1-203ENST00000421646 BIVM-ERCC5R4GMW8 1640 aa20.91■□□□□ 0.94
XIRP1-203ENST00000421646 HNRNPUL2Q1KMD3 747 aaKnown RBP20.86■□□□□ 0.93
XIRP1-203ENST00000421646 NCAPD3P42695 1498 aa20.84■□□□□ 0.93
XIRP1-203ENST00000421646 HMGXB3Q12766 1538 aa20.83■□□□□ 0.93
XIRP1-203ENST00000421646 APLP2Q06481 763 aa20.83■□□□□ 0.92
XIRP1-203ENST00000421646 ACIN1Q9UKV3 1341 aaKnown RBP20.82■□□□□ 0.92
XIRP1-203ENST00000421646 RANGAP1P46060 587 aaPredicted RBP20.82■□□□□ 0.92
XIRP1-203ENST00000421646 ZNF316A6NFI3 1004 aaPredicted RBP20.8■□□□□ 0.92
XIRP1-203ENST00000421646 PRXQ9BXM0 1461 aa20.79■□□□□ 0.92
XIRP1-203ENST00000421646 ERICH3Q5RHP9 1530 aa20.79■□□□□ 0.92
XIRP1-203ENST00000421646 NEUROD1Q13562 356 aa20.78■□□□□ 0.92
XIRP1-203ENST00000421646 CUX1P39880 1505 aa20.75■□□□□ 0.91
XIRP1-203ENST00000421646 ARAP1Q96P48 1450 aa20.7■□□□□ 0.9
XIRP1-203ENST00000421646 CFTRP13569 1480 aa20.69■□□□□ 0.9
XIRP1-203ENST00000421646 CENPBP07199 599 aaPredicted RBP20.67■□□□□ 0.9
XIRP1-203ENST00000421646 KIF27Q86VH2 1401 aa20.67■□□□□ 0.9
XIRP1-203ENST00000421646 PELP1Q8IZL8 1130 aaKnown RBP20.63■□□□□ 0.89
XIRP1-203ENST00000421646 KANK4Q5T7N3 995 aaPredicted RBP20.59■□□□□ 0.89
XIRP1-203ENST00000421646 GTF3C3Q9Y5Q9 886 aa20.56■□□□□ 0.88
XIRP1-203ENST00000421646 PRDM2Q13029 1718 aa20.52■□□□□ 0.87
XIRP1-203ENST00000421646 ARHGAP35Q9NRY4 1499 aa20.51■□□□□ 0.87
XIRP1-203ENST00000421646 CLSPNQ9HAW4 1339 aa20.5■□□□□ 0.87
XIRP1-203ENST00000421646 DHX57Q6P158 1386 aaKnown RBP20.5■□□□□ 0.87
XIRP1-203ENST00000421646 MIER1Q8N108 512 aa20.49■□□□□ 0.87
XIRP1-203ENST00000421646 RRBP1Q9P2E9 1410 aaKnown RBP20.49■□□□□ 0.87
XIRP1-203ENST00000421646 CUX2O14529 1486 aa20.45■□□□□ 0.86
XIRP1-203ENST00000421646 IGF1RP08069 1367 aa20.45■□□□□ 0.86
XIRP1-203ENST00000421646 CADPSQ9ULU8 1353 aa20.44■□□□□ 0.86
XIRP1-203ENST00000421646 YTHDC1Q96MU7 727 aaKnown RBP20.42■□□□□ 0.86
XIRP1-203ENST00000421646 CCNB3Q8WWL7 1395 aa20.39■□□□□ 0.85
XIRP1-203ENST00000421646 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
XIRP1-203ENST00000421646 CARMIL1Q5VZK9 1371 aa20.35■□□□□ 0.85
XIRP1-203ENST00000421646 TIAM1Q13009 1591 aa20.3■□□□□ 0.84
XIRP1-203ENST00000421646 MAP3K1Q13233 1512 aa20.3■□□□□ 0.84
XIRP1-203ENST00000421646 ITGAEP38570 1179 aa20.27■□□□□ 0.83
XIRP1-203ENST00000421646 CC2D2AQ9P2K1 1620 aa20.26■□□□□ 0.83
XIRP1-203ENST00000421646 FANCD2Q9BXW9 1451 aa20.23■□□□□ 0.83
XIRP1-203ENST00000421646 LRRC9Q6ZRR7 1453 aa20.22■□□□□ 0.83
XIRP1-203ENST00000421646 RAB3GAP2Q9H2M9 1393 aa20.21■□□□□ 0.83
XIRP1-203ENST00000421646 FHAD1B1AJZ9 1412 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms