Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
LTN1O94822 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.57■□□□□ 0.56
LTN1O94822 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.57■□□□□ 0.56
LTN1O94822 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LTN1O94822 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC18.57■□□□□ 0.56
LTN1O94822 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LTN1O94822 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LTN1O94822 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.56■□□□□ 0.56
LTN1O94822 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
LTN1O94822 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LTN1O94822 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.56■□□□□ 0.56
LTN1O94822 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LTN1O94822 SIRPB3P-201ENST00000340424 1216 ntBASIC18.56■□□□□ 0.56
LTN1O94822 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LTN1O94822 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC18.56■□□□□ 0.56
LTN1O94822 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LTN1O94822 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC18.56■□□□□ 0.56
LTN1O94822 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LTN1O94822 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LTN1O94822 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC18.56■□□□□ 0.56
LTN1O94822 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LTN1O94822 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LTN1O94822 AC024075.2-201ENST00000598112 1473 ntBASIC18.56■□□□□ 0.56
LTN1O94822 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LTN1O94822 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC18.56■□□□□ 0.56
LTN1O94822 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LTN1O94822 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LTN1O94822 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LTN1O94822 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LTN1O94822 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LTN1O94822 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LTN1O94822 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.55■□□□□ 0.56
LTN1O94822 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LTN1O94822 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LTN1O94822 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LTN1O94822 SOD2-205ENST00000444946 917 ntTSL 2 BASIC18.55■□□□□ 0.56
LTN1O94822 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC18.55■□□□□ 0.56
LTN1O94822 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC18.55■□□□□ 0.56
LTN1O94822 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC18.55■□□□□ 0.56
LTN1O94822 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC18.55■□□□□ 0.56
LTN1O94822 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LTN1O94822 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LTN1O94822 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.55■□□□□ 0.56
LTN1O94822 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
LTN1O94822 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LTN1O94822 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LTN1O94822 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LTN1O94822 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC18.55■□□□□ 0.56
LTN1O94822 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LTN1O94822 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LTN1O94822 BX640514.1-201ENST00000583223 1918 ntBASIC18.55■□□□□ 0.56
LTN1O94822 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LTN1O94822 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LTN1O94822 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
LTN1O94822 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LTN1O94822 AC092570.1-201ENST00000414446 469 ntBASIC18.55■□□□□ 0.56
LTN1O94822 RPSAP6-201ENST00000417882 882 ntBASIC18.55■□□□□ 0.56
LTN1O94822 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC18.55■□□□□ 0.56
LTN1O94822 AC112250.1-201ENST00000504640 745 ntBASIC18.55■□□□□ 0.56
LTN1O94822 MIR4746-201ENST00000579802 71 ntBASIC18.55■□□□□ 0.56
LTN1O94822 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC18.55■□□□□ 0.56
LTN1O94822 NAV1-210ENST00000593583 726 ntBASIC18.55■□□□□ 0.56
LTN1O94822 AC073869.4-201ENST00000620841 800 ntBASIC18.55■□□□□ 0.56
LTN1O94822 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC18.55■□□□□ 0.56
LTN1O94822 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LTN1O94822 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.55■□□□□ 0.56
LTN1O94822 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LTN1O94822 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LTN1O94822 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC18.55■□□□□ 0.56
LTN1O94822 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LTN1O94822 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LTN1O94822 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LTN1O94822 ENPP7P8-202ENST00000527856 1345 ntBASIC18.55■□□□□ 0.56
LTN1O94822 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC18.54■□□□□ 0.56
LTN1O94822 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 NRADDP-202ENST00000641269 1585 ntBASIC18.54■□□□□ 0.56
LTN1O94822 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
LTN1O94822 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LTN1O94822 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
LTN1O94822 TNRC18P2-201ENST00000417666 2714 ntBASIC18.54■□□□□ 0.56
LTN1O94822 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LTN1O94822 SALL4P6-201ENST00000429385 1691 ntBASIC18.54■□□□□ 0.56
LTN1O94822 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LTN1O94822 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.54■□□□□ 0.56
LTN1O94822 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms