Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.68□□□□□ -0.22
KPNA4O00629 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.68□□□□□ -0.22
KPNA4O00629 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 AC007541.1-201ENST00000570282 1469 ntBASIC13.68□□□□□ -0.22
KPNA4O00629 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.68□□□□□ -0.22
KPNA4O00629 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.68□□□□□ -0.22
KPNA4O00629 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
KPNA4O00629 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.68□□□□□ -0.22
KPNA4O00629 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.68□□□□□ -0.22
KPNA4O00629 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 KRT8P22-201ENST00000562317 1415 ntBASIC13.68□□□□□ -0.22
KPNA4O00629 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
KPNA4O00629 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.68□□□□□ -0.22
KPNA4O00629 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
KPNA4O00629 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.68□□□□□ -0.22
KPNA4O00629 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.68□□□□□ -0.22
KPNA4O00629 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.68□□□□□ -0.22
KPNA4O00629 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.68□□□□□ -0.22
KPNA4O00629 AC098850.1-201ENST00000419919 790 ntBASIC13.68□□□□□ -0.22
KPNA4O00629 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.68□□□□□ -0.22
KPNA4O00629 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.68□□□□□ -0.22
KPNA4O00629 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.68□□□□□ -0.22
KPNA4O00629 SPTLC1P1-201ENST00000447199 261 ntBASIC13.68□□□□□ -0.22
KPNA4O00629 AC026434.2-201ENST00000506094 1078 ntBASIC13.68□□□□□ -0.22
KPNA4O00629 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.68□□□□□ -0.22
KPNA4O00629 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.68□□□□□ -0.22
KPNA4O00629 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.68□□□□□ -0.22
KPNA4O00629 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.68□□□□□ -0.22
KPNA4O00629 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.68□□□□□ -0.22
KPNA4O00629 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
KPNA4O00629 AC004233.3-201ENST00000607794 1269 ntBASIC13.68□□□□□ -0.22
KPNA4O00629 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.68□□□□□ -0.22
KPNA4O00629 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
KPNA4O00629 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.68□□□□□ -0.22
KPNA4O00629 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
KPNA4O00629 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.68□□□□□ -0.22
KPNA4O00629 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 LRRC59-203ENST00000576448 1531 ntBASIC13.68□□□□□ -0.22
KPNA4O00629 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
KPNA4O00629 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.68□□□□□ -0.22
KPNA4O00629 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
KPNA4O00629 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
KPNA4O00629 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.68□□□□□ -0.22
KPNA4O00629 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.68□□□□□ -0.22
KPNA4O00629 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KPNA4O00629 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
KPNA4O00629 AC106818.1-201ENST00000623223 3242 ntBASIC13.68□□□□□ -0.22
KPNA4O00629 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.67□□□□□ -0.22
KPNA4O00629 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
KPNA4O00629 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KPNA4O00629 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.67□□□□□ -0.22
KPNA4O00629 PCDHB18P-202ENST00000526308 3197 ntBASIC13.67□□□□□ -0.22
KPNA4O00629 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.67□□□□□ -0.22
KPNA4O00629 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KPNA4O00629 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KPNA4O00629 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KPNA4O00629 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
KPNA4O00629 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
KPNA4O00629 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KPNA4O00629 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
KPNA4O00629 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
KPNA4O00629 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KPNA4O00629 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KPNA4O00629 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KPNA4O00629 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.67□□□□□ -0.22
KPNA4O00629 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KPNA4O00629 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KPNA4O00629 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.67□□□□□ -0.22
KPNA4O00629 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
KPNA4O00629 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KPNA4O00629 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KPNA4O00629 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KPNA4O00629 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.67□□□□□ -0.22
KPNA4O00629 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
KPNA4O00629 KLF2P2-201ENST00000416807 1039 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms