Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CGNL1Q0VF96 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC19.55■□□□□ 0.72
CGNL1Q0VF96 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CGNL1Q0VF96 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CGNL1Q0VF96 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CGNL1Q0VF96 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC19.55■□□□□ 0.72
CGNL1Q0VF96 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CGNL1Q0VF96 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CGNL1Q0VF96 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CGNL1Q0VF96 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 AC005912.2-201ENST00000619492 2400 ntBASIC19.54■□□□□ 0.72
CGNL1Q0VF96 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 AL627231.1-201ENST00000394467 1125 ntBASIC19.54■□□□□ 0.72
CGNL1Q0VF96 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 NDUFS6P1-201ENST00000485187 316 ntBASIC19.54■□□□□ 0.72
CGNL1Q0VF96 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 SKA2-205ENST00000580541 689 ntTSL 3 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 LINC01815-202ENST00000641468 1409 ntBASIC19.54■□□□□ 0.72
CGNL1Q0VF96 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CGNL1Q0VF96 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC19.53■□□□□ 0.72
CGNL1Q0VF96 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 AC026748.1-201ENST00000624349 3251 ntBASIC19.53■□□□□ 0.72
CGNL1Q0VF96 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 MARK2P16-201ENST00000605714 1723 ntBASIC19.53■□□□□ 0.72
CGNL1Q0VF96 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGNL1Q0VF96 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CGNL1Q0VF96 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC19.52■□□□□ 0.72
CGNL1Q0VF96 RPSAP31-201ENST00000416648 895 ntBASIC19.52■□□□□ 0.72
CGNL1Q0VF96 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC19.52■□□□□ 0.72
CGNL1Q0VF96 ELP5-212ENST00000574255 671 ntTSL 2 BASIC19.52■□□□□ 0.72
CGNL1Q0VF96 SIGLEC18P-201ENST00000602271 909 ntBASIC19.52■□□□□ 0.72
CGNL1Q0VF96 AC007326.1-201ENST00000604539 458 ntBASIC19.52■□□□□ 0.72
CGNL1Q0VF96 AC103810.10-201ENST00000606504 343 ntBASIC19.52■□□□□ 0.72
CGNL1Q0VF96 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CGNL1Q0VF96 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CGNL1Q0VF96 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC19.52■□□□□ 0.72
CGNL1Q0VF96 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CGNL1Q0VF96 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms